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The following 991 regions match your request.

 
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Name Type Description Position Match Score
Ciunshiu_m05722.g gene: Transcription factor TGA like domain scaffold00002:3919236..3919577 11
Ciunshiu_m12654.g gene: TRANSCRIPTION ELONGATION factor S-II scaffold00005:1553162..1559905 11
Ciunshiu_m02595.g gene: Transcription factor (AT4G22600.1); Transcription factor TGA like domain scaffold00020:755810..757003 11
Ciunshiu_m08094.g gene: Transcription factor (AT4G22600.1); Transcription factor TGA like domain scaffold00007:1089800..1090605 11
Ciunshiu_m27643.g gene: Transcription factor TGA like domain scaffold00007:1089978..1090650 11
Ciunshiu_m08247.g gene: Transcription initiation factor TFIID subunit (AT5G65540.1); Bromodomain transcription factor scaffold00007:2335352..2339209 10
Ciunshiu_m15240.g gene: Transcription factor 25 (sp|Q9BQ70|TCF25_HUMAN) transcription factor-like protein (AT2G46900.1); Transcription factor 25 scaffold00026:834594..838943 10
Ciunshiu_m26492.g gene: GATA transcription factor 11 (sp|Q6DBP8|GAT11_ARATH) GATA transcription factor 11 (AT1G08010.2); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00006:2948662..2953711 9
Ciunshiu_m14150.g gene: GATA transcription factor 4 (sp|O49743|GATA4_ARATH) GATA transcription factor 4 (AT3G60530.1); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00015:384485..386579 9
Ciunshiu_m25475.g gene: GATA transcription factor 12 (sp|P69781|GAT12_ARATH) GATA transcription factor 12 (AT5G25830.1); Transcription factor, GATA, plant scaffold00044:557993..559444 9
Ciunshiu_m25098.g gene: GATA transcription factor 4 (sp|O49743|GATA4_ARATH) GATA transcription factor 1 (AT3G24050.1); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00010:238089..239688 9
Ciunshiu_m14015.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcription factor (AT2G42725.1) scaffold00024:849527..850083 9
Ciunshiu_m11601.g gene: GATA transcription factor 1 (sp|Q8LAU9|GATA1_ARATH) GATA transcription factor 1 (AT3G24050.1); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00016:1118866..1121265 9
Ciunshiu_m06683.g gene: Transcription factor IIIA (sp|Q8VHT8|TF3A_RAT) transcription factor IIIA (AT1G72050.1) scaffold00032:528796..531482 9
Ciunshiu_m21769.g gene: GATA transcription factor 15 (sp|Q8LG10|GAT15_ARATH) GATA transcription factor 16 (AT5G49300.1); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00003:2811921..2813234 9
Ciunshiu_m05671.g gene: Transcription elongation factor 1 homolog (sp|Q8LHP0|ELOF1_ORYSJ) transcription elongation factor-like protein (AT5G46030.3); Transcription elongation factor 1 scaffold00002:3488695..3490755 8
Ciunshiu_m01929.g gene: Transcription factor TCP15 (sp|Q9C9L2|TCP15_ARATH) TCP family transcription factor (AT1G69690.1) scaffold00004:1799830..1801005 8
Ciunshiu_m08355.g gene: Transcription factor TCP7 (sp|Q9FMX2|TCP7_ARATH) TCP family transcription factor (AT5G23280.1) scaffold00036:348304..349104 8
Ciunshiu_m26533.g gene: Transcription factor bHLH30 (sp|Q9S7Y1|BH030_ARATH) scaffold00050:98074..99441 8
Ciunshiu_m02509.g gene: Transcription factor TCP19 (sp|Q9LT89|TCP19_ARATH) TCP family transcription factor (AT5G51910.2) scaffold00020:513..1735 8
Ciunshiu_m22543.g gene: Transcription elongation factor SPT6 (sp|Q7KZ85|SPT6H_HUMAN) global transcription factor group B1 (AT1G65440.2); Transcription elongation factor Spt6 scaffold00021:7487..16422 8
Ciunshiu_m22760.g gene: Transcription factor TCP1 (sp|Q9FYG7|TCP1_ARATH) TCP family transcription factor (AT1G67260.1) scaffold00021:1591423..1593073 8
Ciunshiu_m23130.g gene: Transcription factor bHLH123 (sp|Q8GXT3|BH123_ARATH) scaffold00028:178379..180292 8
Ciunshiu_m17896.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcript elongation factor IIS (AT2G38560.1); TRANSCRIPTION ELONGATION factor S-II scaffold00048:643980..646583 7
Ciunshiu_m16884.g gene: Transcription factor bHLH61 (sp|Q9LXA9|BH061_ARATH) transcription regulator (AT3G56220.1) scaffold00011:1246346..1247902 7
Ciunshiu_m16909.g gene: Transcription factor bHLH61 (sp|Q9LXA9|BH061_ARATH) transcription factor SCREAM-like protein (AT2G40435.1) scaffold00011:1415803..1417333 7
Ciunshiu_m26239.g gene: Transcription factor IIA, alpha/beta subunit (AT1G07470.1); Transcription factor IIA, alpha/beta subunit scaffold00006:1111965..1118204 7
Ciunshiu_m10289.g gene: PLATZ transcription factor family protein (AT1G32700.2) scaffold00019:817447..819824 7
Ciunshiu_m14194.g gene: PLATZ transcription factor family protein (AT3G60670.1) scaffold00015:599375..600926 7
Ciunshiu_m02292.g gene: Probable WRKY transcription factor 53 (sp|Q9SUP6|WRK53_ARATH) WRKY family transcription factor (AT4G11070.1) scaffold00029:684527..686405 7
Ciunshiu_m18252.g gene: Heat stress transcription factor B-4 (sp|Q9C635|HSFB4_ARATH) heat shock transcription factor B4 (AT1G46264.1); Heat shock transcription factor family scaffold00009:723614..725189 7
Ciunshiu_m18495.g gene: Putative transcription elongation factor SPT5 homolog 1 (sp|Q9STN3|SPT51_ARATH) global transcription factor group A2 (AT4G08350.1); Transcription elongation factor Spt5 scaffold00009:2509481..2517794 7
Ciunshiu_m23831.g gene: PLATZ transcription factor family protein (AT1G21000.1) scaffold00051:770985..773878 7
Ciunshiu_m05205.g gene: Transcription initiation factor TFIID subunit 8 (sp|Q9SYZ9|TAF8_ARATH) Bromodomain transcription factor (AT1G31240.1); TRANSCRIPTION INITIATION factor TFIID SUBUNIT 8 scaffold00002:283015..284135 7
Ciunshiu_m05580.g gene: General transcription factor IIH subunit 4 (sp|P60027|TF2H4_PANTR) transcription factor-like protein (AT4G17020.1); Transcription factor TFIIH subunit p52/Tfb2 scaffold00002:2968650..2974034 7
Ciunshiu_m05597.g gene: Heat stress transcription factor B-1 (sp|Q96320|HSFB1_ARATH) heat shock transcription factor A1D (AT1G32330.2); Heat shock transcription factor family scaffold00002:3016368..3017155 7
Ciunshiu_m05764.g gene: Heat stress transcription factor A-4a (sp|O49403|HFA4A_ARATH) heat shock transcription factor A4A (AT4G18880.1); Heat shock transcription factor family scaffold00002:4155744..4157900 7
Ciunshiu_m24657.g gene: Transcription elongation factor (TFIIS) family protein (AT4G24200.1); TRANSCRIPTION ELONGATION factor B POLYPEPTIDE 3 scaffold00018:354576..360044 7
Ciunshiu_m09130.g gene: Transcription factor IBH1 (sp|Q01I07|IBH1_ORYSI) sequence-specific DNA binding transcription factor (AT4G30410.2) scaffold00045:443267..444455 7
Ciunshiu_m20606.g gene: BZIP transcription factor, putative (DUF1664) (AT1G24265.2) scaffold00022:981639..990935 7
Ciunshiu_m20667.g gene: Transcription factor MYC1 (sp|Q8W2F1|BH012_ARATH); MYC scaffold00022:1499875..1500479 7
Ciunshiu_m23626.g gene: GATA transcription factor-like protein (AT1G02700.1) scaffold00012:2004821..2005664 7
Ciunshiu_m08710.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcript elongation factor IIS (AT2G38560.1); Transcription factor IIS, N-terminal scaffold00025:769327..770704 7
Ciunshiu_m15765.g gene: Probable WRKY transcription factor 19 (sp|Q9SZ67|WRK19_ARATH) WRKY transcription factor (AT1G64140.1) scaffold00008:1744275..1748423 7
Ciunshiu_m15806.g gene: Probable WRKY transcription factor 53 (sp|Q9SUP6|WRK53_ARATH) WRKY family transcription factor (AT4G23810.1) scaffold00008:1991079..1992923 7
Ciunshiu_m26550.g gene: PLATZ transcription factor family protein (AT1G31040.1) scaffold00050:270834..273646 7
Ciunshiu_m02593.g gene: PLATZ transcription factor family protein (AT3G60670.1) scaffold00020:771608..773102 7
Ciunshiu_m02667.g gene: Transcription factor MYB1R1 (sp|Q2V9B0|MY1R1_SOLTU) myb-like transcription factor family protein (AT5G47390.1) scaffold00020:1349125..1351964 7
Ciunshiu_m11745.g gene: GATA transcription factor 8 (sp|Q9SV30|GATA8_ARATH) Plant-specific GATA-type zinc finger transcription factor family protein (AT3G54810.1); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00033:423562..426663 7
Ciunshiu_m18809.g gene: Transcription factor bHLH61 (sp|Q9LXA9|BH061_ARATH) transcription factor SCREAM-like protein (AT2G40435.1) scaffold00001:846259..847959 7
Ciunshiu_m28431.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcript elongation factor IIS (AT2G38560.1); TRANSCRIPTION ELONGATION factor S-II scaffold00001:1178818..1183097 7
Ciunshiu_m19186.g gene: Transcription factor E2FA (sp|Q9FNY0|E2FA_ARATH) E2F transcription factor 3 (AT2G36010.1); E2F Family scaffold00001:3586579..3590891 7
Ciunshiu_m19310.g gene: Heat stress transcription factor A-3 (sp|Q8GYY1|HSFA3_ARATH) heat shock transcription factor A3 (AT5G03720.2); Heat shock transcription factor family scaffold00001:4560865..4565158 7
Ciunshiu_m15211.g gene: Probable WRKY transcription factor 47 (sp|Q9ZSI7|WRK47_ARATH) WRKY family transcription factor (AT4G01720.1) scaffold00026:630128..633547 7
Ciunshiu_m15279.g gene: Transcription factor HY5 (sp|O24646|HY5_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT5G11260.1); X-box TRANSCRIPTION factor-related scaffold00026:1195554..1198103 7
Ciunshiu_m16837.g gene: Ethylene-responsive transcription factor ABI4 (sp|A0MES8|ABI4_ARATH) scaffold00011:811117..812643 6
Ciunshiu_m13518.g gene: Transcription factor GTE1 (sp|Q84XV2|GTE1_ARATH) Transcription factor GTE6 (AT2G34900.2); FALZ-related BROMOdomain-containing proteinS scaffold00039:82173..86632 6
Ciunshiu_m14124.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) scaffold00015:91448..92074 6
Ciunshiu_m14217.g gene: Myeloid leukemia factor (AT2G45380.2); MYELOID LEUKEMIA factor scaffold00015:752881..755929 6
Ciunshiu_m18418.g gene: Ethylene-responsive transcription factor ERF110 (sp|Q70II3|EF110_ARATH) scaffold00009:1885847..1888086 6
Ciunshiu_m00942.g gene: Heat stress transcription factor B-2a (sp|Q9SCW4|HFB2A_ARATH) winged-helix DNA-binding transcription factor family protein (AT4G11660.1); Heat shock transcription factor family scaffold00013:635116..635947 6
Ciunshiu_m05720.g gene: Trihelix transcription factor ASIL2 (sp|Q9LJG8|ASIL2_ARATH) sequence-specific DNA binding transcription factor (AT3G58630.1) scaffold00002:3848148..3852002 6
Ciunshiu_m17726.g gene: GATA transcription factor 25 (sp|Q9LRH6|GAT25_ARATH) ZIM-like 1 (AT3G21175.2); TRANSCRIPTION factor GATA (GATA binding factor) scaffold00042:966956..978523 6
Ciunshiu_m01682.g gene: Ethylene-responsive transcription factor ESR2 (sp|Q9FYK5|ESR2_ARATH) scaffold00004:223845..225258 6
Ciunshiu_m01833.g gene: Transcription factor MYB1R1 (sp|Q2V9B0|MY1R1_SOLTU) myb-like transcription factor family protein (AT1G70000.2); TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-related scaffold00004:1291806..1293785 6
Ciunshiu_m27224.g gene: Ethylene-responsive transcription factor RAP2-11 (sp|Q6J9S1|RA211_ARATH); SHN (SHINE), DNA binding / TRANSCRIPTION factor scaffold00004:2197359..2198778 6
Ciunshiu_m01986.g gene: Ethylene-responsive transcription factor RAP2-11 (sp|Q6J9S1|RA211_ARATH); SHN (SHINE), DNA binding / TRANSCRIPTION factor scaffold00004:2197377..2198778 6
Ciunshiu_m04852.g gene: Transcription factor GTE1 (sp|Q84XV2|GTE1_ARATH) Transcription factor GTE6 (AT2G34900.2); FALZ-related BROMOdomain-containing proteinS scaffold00054:57661..62655 6
Ciunshiu_m04862.g gene: General transcription factor IIF subunit 2 (sp|P41900|T2FB_DROME) Transcription initiation factor IIF, beta subunit (AT3G52270.1); Transcription initiation factor IIF, beta subunit scaffold00054:90072..93481 6
Ciunshiu_m28843.g gene: Transcription factor RF2a (sp|Q69IL4|RF2A_ORYSJ) Basic-leucine zipper (bZIP) transcription factor family protein (AT4G38900.2) scaffold00018:744503..747470 6
Ciunshiu_m24731.g gene: Transcription initiation factor IIF subunit beta (sp|O94424|T2FB_SCHPO) Transcription initiation factor IIF, beta subunit (AT1G75510.1); Transcription initiation factor IIF, beta subunit scaffold00018:909899..913001 6
Ciunshiu_m14048.g gene: Transcription initiation factor TFIID subunit 13 (sp|Q6NQH4|TAF13_ARATH) TBP-associated factor 13 (AT1G02680.1); Transcription initiation factor IID, 18kDa subunit scaffold00024:1089901..1093242 6
Ciunshiu_m20555.g gene: Transcription and mRNA export factor SUS1 (sp|Q6NQ54|SUS1_ARATH); ENHANCER OF YELLOW 2 TRANSCRIPTION factor scaffold00022:672566..674643 6
Ciunshiu_m23642.g gene: Transcription initiation factor TFIID subunit 13 (sp|Q6NQH4|TAF13_ARATH) TBP-associated factor 13 (AT1G02680.1); Transcription initiation factor IID, 18kDa subunit scaffold00012:2139160..2145912 6
Ciunshiu_m08707.g gene: Elongation factor (AT3G59670.1) scaffold00025:739067..744375 6
Ciunshiu_m08715.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcript elongation factor IIS (AT2G38560.1); Transcription elongation factor S-II, central domain scaffold00025:840075..840670 6
Ciunshiu_m21517.g gene: Transcription initiation factor IIF subunit alpha (sp|Q9SU25|T2FA_ARATH) transcription initiation factor IIF subunit alpha RAP74 (AT4G12610.1); Transcription initiation factor IIF, alpha subunit scaffold00003:1111319..1115364 6
Ciunshiu_m22356.g gene: Transcription initiation factor IIB (sp|Q54FD6|TF2B_DICDI) plant-specific TFIIB-related protein (AT4G36650.1); Transcription factor TFIIB scaffold00017:1126894..1130511 6
Ciunshiu_m15601.g gene: Transcription initiation factor IIB (sp|P48513|TF2B_SOYBN) Cyclin-like family protein (AT3G10330.1); Transcription factor TFIIB scaffold00008:589935..595144 6
Ciunshiu_m15766.g gene: Ethylene-responsive transcription factor CRF2 (sp|Q9SUQ2|CRF2_ARATH) cytokinin response factor 2 (AT4G23750.2); SHN (SHINE), DNA binding / TRANSCRIPTION factor scaffold00008:1876617..1878210 6
Ciunshiu_m03622.g gene: Transcription initiation factor TFIID subunit 5 (sp|Q6S7B0|TAF5_ARATH) TBP-associated factor 5 (AT5G25150.2); TRANSCRIPTION INITIATION factor TFIID scaffold00023:497177..503389 6
Ciunshiu_m07965.g gene: Nuclear receptor coactivator (AT1G72390.1); Transcription factor Spt20 scaffold00007:95018..101229 6
Ciunshiu_m05946.g gene: Sequence-specific DNA binding transcription factor (AT1G21200.2) scaffold00037:731785..733161 6
Ciunshiu_m19346.g gene: Sequence-specific DNA binding transcription factor (AT3G10040.1) scaffold00001:4716037..4717524 6
Ciunshiu_m10480.g gene: Nuclear transcription factor Y subunit B-2 (sp|Q9FGJ3|NFYB2_ARATH) nuclear factor Y, subunit B2 (AT5G47640.1); CCAAT-binding TRANSCRIPTION factor-related scaffold00040:539965..540525 5
Ciunshiu_m10476.g gene: Nuclear transcription factor Y subunit B-9 (sp|Q9SFD8|NFYB9_ARATH) Histone superfamily protein (AT1G21970.1); CCAAT-binding TRANSCRIPTION factor-related scaffold00040:580854..581585 5
Ciunshiu_m10323.g gene: Transcription initiation factor TFIID subunit 9 (sp|Q9SYH2|TAF9_ARATH) TATA binding protein associated factor 21kDa subunit (AT1G54140.1); Transcription initiation factor TAFII31 scaffold00019:1049542..1051420 5
Ciunshiu_m27797.g gene: Transcription initiation factor TFIID subunit 9 (sp|Q9SYH2|TAF9_ARATH) TATA binding protein associated factor 21kDa subunit (AT1G54140.1); Transcription initiation factor TAFII31 scaffold00019:1049542..1051443 5
Ciunshiu_m10331.g gene: Transcription initiation factor TFIID subunit 15 (sp|Q9AST1|TAF15_ARATH) TBP-associated factor 15 (AT1G50300.1) scaffold00019:1175497..1181047 5
Ciunshiu_m18271.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH); NAC domain scaffold00009:792378..796759 5
Ciunshiu_m18331.g gene: Transcription termination factor 3, mitochondrial (sp|Q5ZJC8|MTEF3_CHICK) Mitochondrial transcription termination factor family protein (AT2G44020.1); CGI-12 protein-related scaffold00009:1191306..1192634 5
Ciunshiu_m25174.g gene: Transcription factor IIIB 90 kDa subunit (sp|Q8CFK2|TF3B_MOUSE) Cyclin/Brf1-like TBP-binding protein (AT3G09360.2); Transcription factor TFIIB scaffold00010:859080..867178 5
Ciunshiu_m25280.g gene: B3 domain-containing transcription factor ABI3 (sp|Q01593|ABI3_ARATH) AP2/B3-like transcriptional factor family protein (AT3G24650.1) scaffold00010:1524831..1527968 5
Ciunshiu_m05321.g gene: Nuclear transcription factor Y subunit A-7 (sp|Q84JP1|NFYA7_ARATH) nuclear factor Y, subunit A7 (AT1G30500.2); CCAAT-binding transcription factor, subunit B scaffold00002:1129191..1133349 5
Ciunshiu_m27456.g gene: Transcription factor TCP2 (sp|Q93V43|TCP2_ARATH) TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (AT4G18390.1) scaffold00002:1631057..1640302 5
Ciunshiu_m05385.g gene: Transcription factor TCP2 (sp|Q93V43|TCP2_ARATH) TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (AT4G18390.2) scaffold00002:1632408..1633907 5
Ciunshiu_m05629.g gene: Rapid alkalinization factor 23 (sp|Q9LUS7|RLF23_ARATH); Rapid ALkalinization Factor scaffold00002:3198510..3198821 5
Ciunshiu_m05622.g gene: B3 domain-containing transcription factor LEC2 (sp|Q1PFR7|LEC2_ARATH) AP2/B3-like transcriptional factor family protein (AT1G28300.1) scaffold00002:3227200..3229575 5
Ciunshiu_m05731.g gene: Transcription factor TGA5 (sp|Q39163|TGA5_ARATH) transcription factor-like protein (AT4G18650.1); CAMP-RESPONSE element binding protein-related scaffold00002:3915885..3916604 5
Ciunshiu_m05741.g gene: Rho termination factor, N-terminal scaffold00002:3990313..3992266 5
Ciunshiu_m17605.g gene: Transcription initiation factor TFIID subunit 4b (sp|F4K4L7|TAF4B_ARATH) TBP-associated factor 4 (AT5G43130.2) scaffold00042:53783..60288 5
Ciunshiu_m17706.g gene: Transcription initiation factor IIA subunit 2 (sp|Q39236|T2AG_ARATH) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) (AT4G24440.2); Transcription initiation factor IIA, gamma subunit scaffold00042:884824..886998 5
Ciunshiu_m01840.g gene: Transcription factor bHLH79 (sp|Q9LV17|BH079_ARATH) transcription factor BIG PETAL P (BPE) (AT1G59640.1); STEROL regulatory element-binding protein scaffold00004:1355430..1359276 5
Ciunshiu_m02035.g gene: B3 domain-containing transcription factor FUS3 (sp|Q9LW31|FUS3_ARATH) AP2/B3-like transcriptional factor family protein (AT3G26790.1) scaffold00004:2561497..2563910 5
Ciunshiu_m02140.g gene: Nuclear transcription factor Y subunit A-1 (sp|Q9LXV5|NFYA1_ARATH) nuclear factor Y, subunit A1 (AT5G12840.5); CCAAT-binding transcription factor, subunit B scaffold00004:3177088..3180420 5
Ciunshiu_m08424.g gene: Transcription factor PERIANTHIA (sp|Q9SX27|PAN_ARATH) bZIP transcription factor family protein (AT1G68640.1); CAMP-RESPONSE element binding protein-related scaffold00036:857356..861837 5
Ciunshiu_m08429.g gene: Protein PHR1-LIKE 1 (sp|Q8GUN5|PHL1_ARATH) myb-like transcription factor family protein (AT1G68670.1); MYB family TRANSCRIPTION factor scaffold00036:942330..944917 5
Ciunshiu_m24682.g gene: Transcription factor E2FC (sp|Q9FV70|E2FC_ARATH) winged-helix DNA-binding transcription factor family protein (AT1G47870.2); E2F Family scaffold00018:543860..548121 5
Ciunshiu_m24716.g gene: Probable transcription factor PosF21 (sp|Q04088|POF21_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT4G38900.2) scaffold00018:744800..747470 5
Ciunshiu_m04176.g gene: Basic-leucine zipper (bZIP) transcription factor family protein (AT4G35040.2) scaffold00031:311536..313366 5
Ciunshiu_m27377.g gene: Basic-leucine zipper (bZIP) transcription factor family protein (AT4G35040.2) scaffold00031:311536..315227 5
Ciunshiu_m20556.g gene: Nuclear transcription factor Y subunit gamma (sp|Q62725|NFYC_RAT) nuclear factor Y, subunit C13 (AT5G43250.1); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00022:669176..669607 5
Ciunshiu_m11636.g gene: NAC transcription factor 56 (sp|Q9LD44|NAC56_ARATH); NAC domain scaffold00016:1432599..1434191 5
Ciunshiu_m04832.g gene: Transcription factor TGA2 (sp|P43273|TGA2_ARATH) transcription factor-like protein (AT3G14880.2); CAMP-RESPONSE element binding protein-related scaffold00043:796683..797670 5
Ciunshiu_m23449.g gene: Transcription termination factor 3, mitochondrial (sp|Q6P6Q6|MTEF3_RAT) Mitochondrial transcription termination factor family protein (AT4G02990.2); CGI-12 protein-related scaffold00012:777803..780411 5
Ciunshiu_m23530.g gene: Nuclear transcription factor Y subunit B-5 (sp|O82248|NFYB5_ARATH) nuclear factor Y, subunit B5 (AT2G47810.1); CCAAT-binding TRANSCRIPTION factor-related scaffold00012:1315636..1316163 5
Ciunshiu_m23554.g gene: Heat shock factor binding 1 scaffold00012:1431813..1434156 5
Ciunshiu_m23634.g gene: GATA transcription factor 16 (sp|Q9FJ10|GAT16_ARATH) GATA transcription factor 16 (AT5G49300.1); Zinc finger, NHR/GATA-type scaffold00012:2010159..2010624 5
Ciunshiu_m21483.g gene: Homeobox protein SHOOT MERISTEMLESS (sp|Q38874|STM_ARATH) KNOX/ELK homeobox transcription factor (AT1G62360.1); HOMEObox protein TRANSCRIPTION factorS scaffold00003:939135..943446 5
Ciunshiu_m21567.g gene: Nuclear transcription factor Y subunit B-6 (sp|Q84W66|NFYB6_ARATH) nuclear factor Y, subunit B6 (AT5G47670.3); CCAAT-binding TRANSCRIPTION factor-related scaffold00003:1397488..1399821 5
Ciunshiu_m21863.g gene: Heat shock factor binding 1 scaffold00003:3464150..3467019 5
Ciunshiu_m21875.g gene: Nuclear transcription factor Y subunit B-5 (sp|O82248|NFYB5_ARATH) nuclear factor Y, subunit B5 (AT2G47810.1); CCAAT-binding TRANSCRIPTION factor-related scaffold00003:3571475..3572031 5
Ciunshiu_m15550.g gene: Protein SUO (AT3G48050.1); TRANSCRIPTION ELONGATION factor B POLYPEPTIDE 3 scaffold00008:219841..228418 5
Ciunshiu_m15673.g gene: Nuclear transcription factor Y subunit C-3 (sp|Q9ZVL3|NFYC3_ARATH) nuclear factor Y, subunit C3 (AT1G54830.2); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00008:1157562..1157912 5
Ciunshiu_m15816.g gene: Ribosome maturation factor (AT4G10970.2) scaffold00008:2158406..2163276 5
Ciunshiu_m26621.g gene: Nuclear transcription factor Y subunit C-9 (sp|Q8L4B2|NFYC9_ARATH) nuclear factor Y, subunit C9 (AT1G08970.1); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00050:757524..760784 5
Ciunshiu_m03613.g gene: RNA polymerase I-specific transcription initiation factor RRN3 (sp|Q5R4N9|RRN3_PONAB) RNA polymerase I specific transcription initiation factor RRN3 protein (AT2G34750.1); RNA polymerase I specific transcription initiation factor RRN3 scaffold00023:509648..515835 5
Ciunshiu_m03677.g gene: Transcription initiation factor TFIID subunit 10 (sp|O04173|TAF10_ARATH) TBP-associated factor II 15 (AT4G31720.3); Transcription initiation factor TFIID, 23-30kDa subunit scaffold00023:892713..895468 5
Ciunshiu_m03702.g gene: RNA polymerase I-specific transcription initiation factor RRN3 (sp|Q5R4N9|RRN3_PONAB) RNA polymerase I specific transcription initiation factor RRN3 protein (AT2G34750.1); RNA polymerase I specific transcription initiation factor RRN3 scaffold00023:1123670..1130497 5
Ciunshiu_m03743.g gene: Sequence-specific DNA binding transcription factor (AT4G31270.1); Myb_DNA-bind_4 scaffold00023:1409378..1411998 5
Ciunshiu_m22674.g gene: RNA polymerase II transcription elongation factor (AT5G38050.1); EAF family scaffold00021:956502..959336 5
Ciunshiu_m28682.g gene: RNA polymerase II transcription elongation factor (AT5G38050.1); EAF family scaffold00021:956502..959742 5
Ciunshiu_m22710.g gene: Nuclear transcription factor Y subunit C-2 (sp|Q8LCG7|NFYC2_ARATH) nuclear factor Y, subunit C3 (AT1G54830.3); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00021:1089537..1091970 5
Ciunshiu_m07989.g gene: Transcription initiation factor TFIID subunit 9 (sp|Q9SYH2|TAF9_ARATH) TATA binding protein associated factor 21kDa subunit (AT1G54140.1); Transcription initiation factor TAFII31 scaffold00007:336895..338445 5
Ciunshiu_m08006.g gene: Transcription initiation factor TFIID subunit 12b (sp|B2C6R6|TAFCL_ARATH) Transcription initiation factor TFIID subunit A (AT1G17440.2) scaffold00007:418485..424025 5
Ciunshiu_m08008.g gene: Nuclear transcription factor Y subunit A-3 (sp|Q93ZH2|NFYA3_ARATH) nuclear factor Y, subunit A3 (AT1G72830.1); CCAAT-binding transcription factor, subunit B scaffold00007:565908..570173 5
Ciunshiu_m08222.g gene: Transcription factor bHLH131 (sp|P0CB25|BH131_ARATH) transcription factor bHLH131-like protein (AT4G38070.1); STEROL regulatory element-binding protein scaffold00007:2178366..2180886 5
Ciunshiu_m08271.g gene: Transcription factor GTE2 (sp|Q9LXA7|GTE2_ARATH) global transcription factor group E2 (AT5G10550.1); FALZ-related BROMOdomain-containing proteinS scaffold00007:2562481..2564066 5
Ciunshiu_m05907.g gene: Nuclear transcription factor Y subunit A-1 (sp|Q9LXV5|NFYA1_ARATH) nuclear factor Y, subunit A1 (AT5G12840.5); CCAAT-binding transcription factor, subunit B scaffold00037:474415..479259 5
Ciunshiu_m18743.g gene: Transcription factor bHLH140 (sp|Q9M041|BH140_ARATH) transcription factor bHLH140-like protein (AT5G01305.1); STEROL regulatory element-binding protein scaffold00001:286969..287478 5
Ciunshiu_m18995.g gene: Transcription elongation factor TFIIS (sp|Q9ZVH8|RDO2_ARATH) transcript elongation factor IIS (AT2G38560.1) scaffold00001:2170593..2171190 5
Ciunshiu_m19147.g gene: Nuclear transcription factor Y subunit A-10 (sp|Q8LFU0|NFYAA_ARATH) nuclear factor Y, subunit A10 (AT5G06510.2); CCAAT-binding transcription factor, subunit B scaffold00001:3299963..3304860 5
Ciunshiu_m19284.g gene: Transcription initiation factor TFIID subunit 12 (sp|Q9SR71|TAF12_ARATH) TBP-associated factor 12 (AT3G10070.1) scaffold00001:4205184..4210810 5
Ciunshiu_m11248.g gene: Transcription factor TGA7 (sp|Q93ZE2|TGA7_ARATH) bZIP transcription factor family protein (AT5G65210.2); CAMP-RESPONSE element binding protein-related scaffold00014:1376749..1381601 5
Ciunshiu_m23241.g gene: Nuclear transcription factor Y subunit B-8 (sp|Q8VYK4|NFYB8_ARATH) nuclear factor Y, subunit B8 (AT2G37060.2); CCAAT-binding TRANSCRIPTION factor-related scaffold00028:963889..966666 5
Ciunshiu_m17848.g gene: ADP-ribosylation factor (sp|P91924|ARF_DUGJA) ADP-ribosylation factor B1B (AT5G17060.1); ADP RIBOSYLATION factor-related scaffold00048:265874..271062 4
Ciunshiu_m13532.g gene: Transcription initiation factor TFIID subunit 11 (sp|Q9M565|TAF11_ARATH) TBP-associated factor 11 (AT4G20280.1); TAFII28-like protein scaffold00039:104091..106166 4
Ciunshiu_m13526.g gene: Membrane-bound transcription factor site-2 protease homolog (sp|F4JUU5|S2P_ARATH) Peptidase M50 family protein (AT4G20310.4); Membrane-bound transcription factor site-2 protease scaffold00039:113022..120114 4
Ciunshiu_m13555.g gene: Transcription elongation factor SPT4 homolog 2 (sp|Q94C60|SPT42_ARATH) SPT4 homolog 2 (AT5G63670.1); Transcription initiation Spt4-like scaffold00039:338555..341693 4
Ciunshiu_m13618.g gene: Transcription factor PIF3 (sp|O80536|PIF3_ARATH); STEROL regulatory element-binding protein scaffold00039:877055..878591 4
Ciunshiu_m26082.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) myb-like HTH transcriptional regulator family protein (AT2G38300.1) scaffold00006:232488..234057 4
Ciunshiu_m26088.g gene: Basic leucine zipper 34 (sp|F4IN23|BZP34_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT2G42380.2); X-box TRANSCRIPTION factor-related scaffold00006:240617..242226 4
Ciunshiu_m26251.g gene: Transcription factor LUX (sp|Q9SNB4|PCL1_ARATH) Homeodomain-like superfamily protein (AT3G46640.3) scaffold00006:1179765..1182936 4
Ciunshiu_m26257.g gene: Scarecrow-like transcription factor 11 (SCL11) (AT5G59460.1); M-phase phosphoprotein 6 scaffold00006:1277873..1280703 4
Ciunshiu_m26273.g gene: MADS-box transcription factor PHERES 2 (sp|Q7XJK8|PHE2_ARATH); MADS box protein scaffold00006:1363974..1364789 4
Ciunshiu_m26444.g gene: Elongation factor 1-alpha (sp|O64937|EF1A_ORYSJ) GTP binding Elongation factor Tu family protein (AT5G60390.1); TRANSLATION factor scaffold00006:2512492..2514972 4
Ciunshiu_m26446.g gene: Elongation factor 1-alpha (sp|O64937|EF1A_ORYSJ) GTP binding Elongation factor Tu family protein (AT1G07920.1); TRANSLATION factor scaffold00006:2518978..2521269 4
Ciunshiu_m26436.g gene: Elongation factor 1-alpha (sp|Q03033|EF1A_WHEAT) GTP binding Elongation factor Tu family protein (AT5G60390.3); TRANSLATION factor scaffold00006:2529380..2529844 4
Ciunshiu_m26437.g gene: Elongation factor 1-alpha (sp|O64937|EF1A_ORYSJ) GTP binding Elongation factor Tu family protein (AT5G60390.3); TRANSLATION factor scaffold00006:2535322..2535540 4
Ciunshiu_m10265.g gene: RNA polymerase sigma factor sigA (sp|O24629|SIGA_ARATH) sigma factor A (AT1G64860.1); RNA POLYMERASE SIGMA factor RPO scaffold00019:542710..547167 4
Ciunshiu_m14116.g gene: BZIP domain class transcription factor (DUF630 and DUF632) (AT3G60320.1); Uncharacterized scaffold00015:35476..40201 4
Ciunshiu_m14121.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:57504..57968 4
Ciunshiu_m14119.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:64195..65000 4
Ciunshiu_m14122.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:70831..71531 4
Ciunshiu_m14120.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:77383..77817 4
Ciunshiu_m14130.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:98867..99568 4
Ciunshiu_m14132.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:124692..125678 4
Ciunshiu_m14125.g gene: Ethylene-responsive transcription factor 13 (sp|Q8L9K1|ERF99_ARATH) ethylene-responsive element binding factor 13 (AT2G44840.1) scaffold00015:138939..139703 4
Ciunshiu_m14136.g gene: Mitochondrial transcription termination factor family protein (AT3G60400.1); CGI-12 protein-related scaffold00015:203833..205515 4
Ciunshiu_m14169.g gene: CCR4-NOT transcription complex subunit 1 (sp|A5YKK6|CNOT1_HUMAN) transcription regulator (AT1G02080.3); CCR4-NOT TRANSCRIPTION COMPLEX scaffold00015:396461..417198 4
Ciunshiu_m14401.g gene: ADP-ribosylation factor-like protein 5 (sp|Q55AD9|ARL5_DICDI) ADP-ribosylation factor C1 (AT3G22950.1); ADP RIBOSYLATION factor-related scaffold00015:2019156..2019515 4
Ciunshiu_m02263.g gene: Splicing factor 3A subunit 3 (sp|Q9D554|SF3A3_MOUSE) splicing factor-like protein (AT5G06160.1); SPLICING factor SF3A-related scaffold00029:216285..222650 4
Ciunshiu_m07346.g gene: Peptide chain release factor PrfB3, chloroplastic (sp|F4J264|PRFB3_ARATH) peptide chain release factor (AT3G57190.1); PEPTIDE CHAIN RELEASE factor scaffold00049:448123..452952 4
Ciunshiu_m00810.g gene: Transcription factor bHLH49 (sp|Q9CAA9|BH049_ARATH); STEROL regulatory element-binding protein scaffold00046:293905..296097 4
Ciunshiu_m18341.g gene: Mitochondrial transcription termination factor family protein (AT4G09620.3); CGI-12 protein-related scaffold00009:1354529..1356509 4
Ciunshiu_m18437.g gene: G-box-binding factor 4 (sp|P42777|GBF4_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT5G44080.1) scaffold00009:2051744..2055117 4
Ciunshiu_m18462.g gene: Transcription factor VIP1 (sp|Q9MA75|VIP1_ARATH) VIRE2-interacting protein 1 (AT1G43700.1) scaffold00009:2225051..2229252 4
Ciunshiu_m01005.g gene: MADS-box transcription factor 6 (sp|Q6EU39|MADS6_ORYSJ) K-box region and MADS-box transcription factor family protein (AT1G24260.1); MADS box protein scaffold00013:1002495..1008480 4
Ciunshiu_m01014.g gene: Transcription factor bHLH126 (sp|Q9STJ6|BH126_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G25410.1); Achaete-scute transcription factor-related scaffold00013:1167717..1169874 4
Ciunshiu_m01013.g gene: Transcription factor bHLH36 (sp|Q9FLI1|BH036_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G51780.2); Achaete-scute transcription factor-related scaffold00013:1174901..1185360 4
Ciunshiu_m25416.g gene: Bromo-adjacent homology (BAH) domain-containing protein (AT5G11470.1); PHD FINGER TRANSCRIPTION factor scaffold00044:7117..19681 4
Ciunshiu_m28891.g gene: Bromo-adjacent homology (BAH) domain-containing protein (AT5G11470.1); PHD FINGER TRANSCRIPTION factor scaffold00044:7908..19681 4
Ciunshiu_m25453.g gene: Splicing factor 3B subunit 1 (sp|O57683|SF3B1_XENLA) splicing factor (AT5G64270.1); SPLICING factor 3B, SUBUNIT 1-related scaffold00044:331468..335265 4
Ciunshiu_m25471.g gene: Elongation factor Ts (DUF810) (AT2G25800.1) scaffold00044:520747..526156 4
Ciunshiu_m25281.g gene: Transcription factor PIF1 (sp|Q8GZM7|PIF1_ARATH) phytochrome interacting factor 3-like 5 (AT2G20180.4); STEROL regulatory element-binding protein scaffold00010:1578508..1584436 4
Ciunshiu_m25363.g gene: Protein SCARECROW (sp|Q9M384|SCR_ARATH) GRAS family transcription factor (AT3G54220.1) scaffold00010:2248690..2250246 4
Ciunshiu_m05206.g gene: Mitochondrial transcription termination factor family protein (AT4G19650.2); CGI-12 protein-related scaffold00002:191411..193153 4
Ciunshiu_m05251.g gene: Cyclin-D-binding Myb-like transcription factor 1 (sp|Q9Y222|DMTF1_HUMAN) myb family transcription factor (AT5G41020.1); MYB-LIKE DNA-binding protein MYB scaffold00002:641651..644242 4
Ciunshiu_m27452.g gene: Nuclear transcription factor Y subunit A-7 (sp|Q84JP1|NFYA7_ARATH) nuclear factor Y, subunit A7 (AT1G30500.2) scaffold00002:1129191..1133399 4
Ciunshiu_m05375.g gene: Mitochondrial transcription termination factor family protein (AT2G34620.1); CGI-12 protein-related scaffold00002:1536692..1537628 4
Ciunshiu_m27464.g gene: Transcription factor bHLH118 (sp|Q9STJ7|BH118_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G20970.1); Achaete-scute transcription factor-related scaffold00002:3158507..3161735 4
Ciunshiu_m05655.g gene: Auxin response factor 3 (sp|O23661|ARFC_ARATH) Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein (AT2G33860.1) scaffold00002:3448261..3453880 4
Ciunshiu_m05732.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) myb-like HTH transcriptional regulator family protein (AT2G38300.1) scaffold00002:3893347..3896079 4
Ciunshiu_m17690.g gene: Transcription factor bHLH93 (sp|Q9LSL1|BH093_ARATH) beta HLH protein 93 (AT5G65640.1) scaffold00042:710521..712033 4
Ciunshiu_m01741.g gene: ADP-ribosylation factor (sp|P49076|ARF_MAIZE) ADP-ribosylation factor A1B (AT5G14670.3); ADP RIBOSYLATION factor-related scaffold00004:621064..623413 4
Ciunshiu_m01867.g gene: Heat-inducible transcription repressor (AT3G17900.1) scaffold00004:1557365..1563091 4
Ciunshiu_m02043.g gene: GSH-induced LITAF domain protein (AT5G13190.1); LIPOPOLYSACCHARIDE-INDUCED TRANSCRIPTION factor REGULATING TUMOR NECROSIS factor ALPHA scaffold00004:2491836..2494095 4
Ciunshiu_m27424.g gene: Elongation factor 1-alpha (sp|P43643|EF1A_TOBAC) GTP binding Elongation factor Tu family protein (AT1G07930.1); TRANSLATION factor scaffold00054:47212..50191 4
Ciunshiu_m04849.g gene: Elongation factor 1-alpha (sp|P43643|EF1A_TOBAC) GTP binding Elongation factor Tu family protein (AT1G07930.1); TRANSLATION factor scaffold00054:48121..50191 4
Ciunshiu_m04896.g gene: Elongation factor Ts (sp|A2BW76|EFTS_PROM5) elongation factor Ts family protein (AT4G29060.1); Translation elongation factor EFTs/EF1B scaffold00054:510913..511248 4
Ciunshiu_m04915.g gene: Elongation factor Ts (DUF810) (AT2G25800.1) scaffold00054:823736..828576 4
Ciunshiu_m08436.g gene: Transcription factor TCP12 (sp|A0AQW4|TCP12_ARATH) TCP domain protein 12 (AT1G68800.1) scaffold00036:1085180..1086589 4
Ciunshiu_m24699.g gene: Auxin response factor 5 (sp|P93024|ARFE_ARATH) Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein (AT1G19850.2) scaffold00018:670276..677153 4
Ciunshiu_m12775.g gene: Transcription factor bHLH82 (sp|Q9LSQ3|BH082_ARATH) LJRHL1-like 3 (AT5G58010.1) scaffold00005:2435907..2439903 4
Ciunshiu_m04313.g gene: Mitochondrial transcription termination factor family protein (AT4G38160.4); CGI-12 protein-related scaffold00031:1246276..1247265 4
Ciunshiu_m14008.g gene: Mitochondrial transcription termination factor family protein (AT5G07900.1); CGI-12 protein-related scaffold00024:711590..713878 4
Ciunshiu_m17198.g gene: Transcription elongation factor (AT5G47920.1); Protein of unknown function DUF761, plant scaffold00047:561615..562223 4
Ciunshiu_m09090.g gene: ADP-ribosylation factor 1 (sp|Q96361|ARF1_BRARP) ADP-ribosylation factor 3 (AT2G24765.1); ADP RIBOSYLATION factor-related scaffold00045:149662..153073 4
Ciunshiu_m09183.g gene: Translation initiation factor IF-3 (sp|B2IY66|IF3_NOSP7) Translation initiation factor 3 protein (AT4G30690.1); Translation initiation factor 3 scaffold00045:879605..882601 4
Ciunshiu_m20582.g gene: Nuclear transport factor 2 (sp|Q9C7F5|NTF2_ARATH) nuclear transport factor 2B (AT1G27970.1); NUCLEAR TRANSPORT factor 2 scaffold00022:892656..895343 4
Ciunshiu_m11627.g gene: Mitochondrial transcription termination factor family protein (AT1G79220.1); CGI-12 protein-related scaffold00016:1419741..1420898 4
Ciunshiu_m11650.g gene: Nuclear transcription factor Y subunit C-2 (sp|Q8LCG7|NFYC2_ARATH) ATP-dependent zinc metalloprotease (AT1G56180.1); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00016:1587466..1588278 4
Ciunshiu_m23403.g gene: Ribosome-recycling factor, chloroplastic (sp|Q9M1X0|RRFC_ARATH) ribosome recycling factor, chloroplast precursor (AT3G63190.1); Ribosome recycling factor scaffold00012:342074..346393 4
Ciunshiu_m23459.g gene: Elongation factor Tu, mitochondrial (sp|Q9ZT91|EFTM_ARATH) GTP binding Elongation factor Tu family protein (AT4G02930.1); TRANSLATION factor scaffold00012:714818..719147 4
Ciunshiu_m23506.g gene: RRNA-processing protein (AT4G03180.1); Thyroid transcription factor 1-associated protein 26 scaffold00012:1147275..1149258 4
Ciunshiu_m23520.g gene: Mitochondrial transcription termination factor family protein (AT5G07900.1); CGI-12 protein-related scaffold00012:1239150..1240388 4
Ciunshiu_m21384.g gene: Agamous-like MADS-box protein AGL62 (sp|Q9FKK2|AGL62_ARATH); Transcription factor, MADS-box scaffold00003:276785..277151 4
Ciunshiu_m21434.g gene: Transcription factor MYB1R1 (sp|Q2V9B0|MY1R1_SOLTU) Homeodomain-like superfamily protein (AT1G19000.1) scaffold00003:685018..686882 4
Ciunshiu_m21597.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) myb-like HTH transcriptional regulator family protein (AT2G01060.1) scaffold00003:1493583..1498476 4
Ciunshiu_m21663.g gene: ADP-ribosylation factor (sp|O48920|ARF_VIGUN) ADP-ribosylation factor A1B (AT5G14670.3); ADP RIBOSYLATION factor-related scaffold00003:2025722..2028356 4
Ciunshiu_m28629.g gene: Transcription factor bHLH147 (sp|Q9LSN7|BH147_ARATH) sequence-specific DNA binding transcription factor (AT3G17100.1); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00003:2401967..2403823 4
Ciunshiu_m21720.g gene: Transcription factor bHLH147 (sp|Q9LSN7|BH147_ARATH) sequence-specific DNA binding transcription factor (AT3G17100.1); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00003:2402064..2402690 4
Ciunshiu_m21750.g gene: BZIP transcription factor 53 (sp|Q9LZP8|BZP53_ARATH); Basic-leucine zipper domain scaffold00003:2612725..2613126 4
Ciunshiu_m21874.g gene: Rapid alkalinization factor 23 (sp|Q9LUS7|RLF23_ARATH) rapid alkalinization factor 23 (AT3G16570.1); Rapid ALkalinization Factor scaffold00003:3468152..3468547 4
Ciunshiu_m21893.g gene: Mitochondrial transcription termination factor family protein (AT5G07900.1); CGI-12 protein-related scaffold00003:3664052..3665140 4
Ciunshiu_m21953.g gene: Uncharacterized protein At4g15545 (sp|Q93W28|Y4554_ARATH) PH-response transcription factor (AT4G15545.1) scaffold00003:4068311..4072292 4
Ciunshiu_m22332.g gene: GATA transcription factor 18 (sp|Q8LC79|GAT18_ARATH) GATA type zinc finger transcription factor family protein (AT3G50870.1); Zinc finger, GATA-type scaffold00017:937788..939049 4
Ciunshiu_m22369.g gene: Splicing factor U2af large subunit B (sp|Q8L716|U2A2B_ARATH) U2 snRNP auxilliary factor, large subunit, splicing factor (AT1G60900.1); U2 snRNP auxilliary factor, large subunit, splicing factor scaffold00017:1190467..1195702 4
Ciunshiu_m15577.g gene: Transcription factor MYB1R1 (sp|Q2V9B0|MY1R1_SOLTU) Homeodomain-like superfamily protein (AT1G74840.1); TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-related scaffold00008:443079..445291 4
Ciunshiu_m03594.g gene: Ethylene-responsive transcription factor ERF003 (sp|Q94AW5|ERF03_ARATH) Integrase-type DNA-binding superfamily protein (AT5G25190.1); SHN (SHINE), DNA binding / TRANSCRIPTION factor scaffold00023:351533..352630 4
Ciunshiu_m03672.g gene: ADP-ribosylation factor 3 (sp|P40940|ARF3_ARATH) ADP-ribosylation factor 3 (AT2G24765.1); ADP RIBOSYLATION factor-related scaffold00023:856759..860462 4
Ciunshiu_m02523.g gene: Transcription factor bHLH126 (sp|Q9STJ6|BH126_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G25410.1); Achaete-scute transcription factor-related scaffold00020:137090..138112 4
Ciunshiu_m02582.g gene: Elongation factor G-2, chloroplastic (sp|I1K0K6|EFGC2_SOYBN) Translation elongation factor EFG/EF2 protein (AT1G62750.1); TRANSLATION factor scaffold00020:638673..642621 4
Ciunshiu_m02677.g gene: Ethylene-responsive transcription factor 6 (sp|Q8VZ91|EF103_ARATH) ethylene responsive element binding factor 6 (AT4G17490.1) scaffold00020:1451531..1452944 4
Ciunshiu_m02671.g gene: Ethylene-responsive transcription factor 1A (sp|O80337|EF100_ARATH) ethylene responsive element binding factor 1 (AT4G17500.1) scaffold00020:1465304..1466119 4
Ciunshiu_m22555.g gene: BZIP transcription factor 17 (sp|O22208|BZP17_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT2G40950.1); CAMP-RESPONSE element binding protein-related scaffold00021:169562..172828 4
Ciunshiu_m22561.g gene: Transcription factor LUX (sp|Q9SNB4|PCL1_ARATH) Homeodomain-like superfamily protein (AT3G10760.1) scaffold00021:184150..185118 4
Ciunshiu_m22570.g gene: Probable mediator of RNA polymerase II transcription subunit 26b (sp|Q9FHK9|MD26B_ARATH) Transcription elongation factor (TFIIS) family protein (AT5G05140.1); TRANSCRIPTION ELONGATION factor B POLYPEPTIDE 3 scaffold00021:254056..258382 4
Ciunshiu_m22638.g gene: Putative transcription factor bHLH086 (sp|Q9FJ00|BH086_ARATH) ROOT HAIR DEFECTIVE6 (AT1G66470.1) scaffold00021:784591..785905 4
Ciunshiu_m22677.g gene: Eukaryotic translation initiation factor 5 (sp|P48724|IF5_PHAVU) Translation initiation factor IF2/IF5 (AT1G77840.1); EUKARYOTIC TRANSLATION INITIATION factor scaffold00021:986055..987365 4
Ciunshiu_m25706.g gene: Ethylene-responsive transcription factor SHINE 2 (sp|Q9LFN7|SHN2_ARATH) Integrase-type DNA-binding superfamily protein (AT5G11190.1); SHN (SHINE), DNA binding / TRANSCRIPTION factor scaffold00030:747597..748983 4
Ciunshiu_m25713.g gene: Splicing factor 3A subunit (AT5G04860.1) scaffold00030:811539..814583 4
Ciunshiu_m08237.g gene: MADS-box protein JOINTLESS (sp|Q9FUY6|JOIN_SOLLC) K-box region and MADS-box transcription factor family protein (AT2G22540.1); Transcription factor, K-box scaffold00007:2219201..2221482 4
Ciunshiu_m08279.g gene: Transcription factor bHLH93 (sp|Q9LSL1|BH093_ARATH) beta HLH protein 93 (AT5G65640.1) scaffold00007:2593042..2594634 4
Ciunshiu_m18756.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) myb-like HTH transcriptional regulator family protein (AT2G38300.1) scaffold00001:332826..334491 4
Ciunshiu_m18760.g gene: Nodulation-signaling pathway 2 protein (sp|Q5NE24|NSP2_MEDTR); Transcription factor GRAS scaffold00001:372593..373825 4
Ciunshiu_m28430.g gene: Elongation factor P (sp|B1XKV1|EFP_SYNP2) elongation factor P (EF-P) family protein (AT3G08740.1); ELONGATION factor P scaffold00001:1113441..1118618 4
Ciunshiu_m18845.g gene: Elongation factor P (sp|B1XKV1|EFP_SYNP2) elongation factor P (EF-P) family protein (AT3G08740.1); Translation elongation factor P scaffold00001:1113467..1118618 4
Ciunshiu_m18908.g gene: Protein SCARECROW (sp|Q9AVK4|SCR_PEA) GRAS family transcription factor (AT3G54220.1) scaffold00001:1510035..1513155 4
Ciunshiu_m28441.g gene: Mitochondrial transcription termination factor family protein (AT4G14605.2); CGI-12 protein-related scaffold00001:1822343..1825871 4
Ciunshiu_m19012.g gene: Transcription termination factor family protein (AT5G06811.1); CGI-12 protein-related scaffold00001:2214476..2216233 4
Ciunshiu_m19016.g gene: Transcription termination factor family protein (AT5G06811.1); CGI-12 protein-related scaffold00001:2218626..2220347 4
Ciunshiu_m19173.g gene: Mitochondrial transcription termination factor family protein (AT2G36000.1); CGI-12 protein-related scaffold00001:3583266..3584036 4
Ciunshiu_m11217.g gene: Mitochondrial transcription termination factor family protein (AT5G07900.1); CGI-12 protein-related scaffold00014:1054232..1055398 4
Ciunshiu_m11323.g gene: General transcription factor IIH subunit 3 (sp|Q86IB5|TF2H3_DICDI) basal transcription factor complex subunit-like protein (AT1G18340.1); TFIIH subunit Tfb4/p34 scaffold00014:1829786..1834084 4
Ciunshiu_m15185.g gene: Peptide chain release factor 1 (sp|A8GXI1|RF1_RICB8) Peptide chain release factor 1 (AT2G47020.1); PEPTIDE CHAIN RELEASE factor scaffold00026:533236..540932 4
Ciunshiu_m15198.g gene: Transcription factor APG (sp|Q6AT90|APG_ORYSJ) phytochrome interacting factor 3-like 1 (AT2G46970.1); STEROL regulatory element-binding protein scaffold00026:666470..670609 4
Ciunshiu_m16756.g gene: Transcription factor DIVARICATA (sp|Q8S9H7|DIV_ANTMA) Duplicated homeodomain-like superfamily protein (AT3G11280.2) scaffold00011:198832..200634 3
Ciunshiu_m16776.g gene: Eukaryotic translation initiation factor 3 subunit F (sp|O04202|EIF3F_ARATH) eukaryotic translation initiation factor 2 (AT2G39990.1); EUKARYOTIC TRANSLATION INITIATION factor 3 SUBUNIT F-related scaffold00011:322339..325500 3
Ciunshiu_m16834.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) Homeodomain-like superfamily protein (AT2G40260.1) scaffold00011:866835..868343 3
Ciunshiu_m16936.g gene: Ethylene-responsive transcription factor LEP (sp|Q9M644|LEP_ARATH) Integrase-type DNA-binding superfamily protein (AT5G13910.1) scaffold00011:1857992..1858888 3
Ciunshiu_m26098.g gene: Increased DNA methylation 1 (sp|F4IXE7|IDM1_ARATH) PHD finger transcription factor (AT5G58610.8) scaffold00006:362338..370194 3
Ciunshiu_m26152.g gene: Transcription factor DIVARICATA (sp|Q8S9H7|DIV_ANTMA) Duplicated homeodomain-like superfamily protein (AT2G38090.1) scaffold00006:658944..661670 3
Ciunshiu_m26209.g gene: Transcription elongation factor B polypeptide 1 (sp|P83941|ELOC_RAT) BTB/POZ domain-containing protein (AT5G59140.1) scaffold00006:980911..982878 3
Ciunshiu_m26218.g gene: Eukaryotic translation initiation factor 3 subunit G (sp|Q28CY2|EIF3G_XENTR) eukaryotic translation initiation factor 3G1 (AT3G11400.1); Eukaryotic translation initiation factor 3 subunit G scaffold00006:1016499..1018785 3
Ciunshiu_m26336.g gene: Actin-depolymerizing factor 1 (sp|Q9FVI2|ADF1_PETHY) actin depolymerizing factor 4 (AT5G59890.2); ADF/Cofilin/Destrin scaffold00006:1730805..1732013 3
Ciunshiu_m28968.g gene: Actin-depolymerizing factor 1 (sp|Q9FVI2|ADF1_PETHY) actin depolymerizing factor 4 (AT5G59890.3); ADF/Cofilin/Destrin scaffold00006:1730805..1732525 3
Ciunshiu_m26392.g gene: Ethylene-responsive transcription factor RAP2-7 (sp|Q9SK03|RAP27_ARATH) related to AP2.7 (AT2G28550.1) scaffold00006:2274264..2278285 3
Ciunshiu_m26441.g gene: Auxin response factor 4 (sp|Q9ZTX9|ARFD_ARATH) auxin response factor 4 (AT5G60450.2) scaffold00006:2583216..2589176 3
Ciunshiu_m26457.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC domain containing protein 2 (AT3G15510.1) scaffold00006:2630782..2633138 3
Ciunshiu_m26456.g gene: DNA polymerase epsilon subunit C (sp|Q6BX14|DPB3_DEBHA) nuclear factor Y, subunit C10 (AT1G07980.1); HISTONE-LIKE TRANSCRIPTION factor CCAAT-related scaffold00006:2663035..2664867 3
Ciunshiu_m26480.g gene: Transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) (AT5G60680.1); Senescence regulator S40 scaffold00006:2828174..2828677 3
Ciunshiu_m26493.g gene: Auxin response factor 18 (sp|Q653H7|ARFR_ORYSJ) auxin response factor 10 (AT2G28350.1) scaffold00006:2936916..2942828 3
Ciunshiu_m10274.g gene: Growth-regulating factor 5 (sp|Q6AWY4|GRF5_ORYSJ) growth-regulating factor 5 (AT3G13960.1) scaffold00019:660906..664952 3
Ciunshiu_m10296.g gene: Eukaryotic translation initiation factor 2 subunit beta (sp|Q41969|IF2B_ARATH); Translation initiation factor IF2/IF5, N-terminal scaffold00019:879580..879960 3
Ciunshiu_m14139.g gene: Ethylene-responsive transcription factor ERF034 (sp|Q8LBQ7|ERF34_ARATH) Integrase-type DNA-binding superfamily protein (AT3G60490.1) scaffold00015:247518..248306 3
Ciunshiu_m14155.g gene: Elongation factor G-2, mitochondrial (sp|F4IW10|EFGM2_ARATH) Translation elongation factor EFG/EF2 protein (AT1G45332.1); Translation elongation factor EFG/EF2 scaffold00015:298674..305071 3
Ciunshiu_m14184.g gene: Scarecrow-like protein 6 (sp|O81316|SCL6_ARATH) GRAS family transcription factor (AT4G00150.1) scaffold00015:536063..538183 3
Ciunshiu_m14183.g gene: Scarecrow-like protein 6 (sp|O81316|SCL6_ARATH) GRAS family transcription factor (AT4G00150.1) scaffold00015:553068..555176 3
Ciunshiu_m14199.g gene: Axial regulator YABBY 1 (sp|O22152|YAB1_ARATH) Plant-specific transcription factor YABBY family protein (AT2G45190.1) scaffold00015:615172..617793 3
Ciunshiu_m14237.g gene: Growth-regulating factor 12 (sp|Q6AWX7|GRF12_ORYSJ) scaffold00015:925544..927774 3
Ciunshiu_m14270.g gene: Ethylene-responsive transcription factor RAP2-11 (sp|Q6J9S1|RA211_ARATH); BETA CATENIN-related ARMADILLO repeat-containing scaffold00015:1167200..1169431 3
Ciunshiu_m14335.g gene: Actin-depolymerizing factor 10 (sp|Q9LQ81|ADF10_ARATH) actin depolymerizing factor 11 (AT1G01750.2); ADF/Cofilin/Destrin scaffold00015:1407404..1407889 3
Ciunshiu_m07014.g gene: Elongation factor Tu, chloroplastic (sp|Q43467|EFTU1_SOYBN) RAB GTPase homolog E1B (AT4G20360.1); TRANSLATION factor scaffold00038:254966..256096 3
Ciunshiu_m02239.g gene: Axial regulator YABBY 5 (sp|Q8GW46|YAB5_ARATH) plant-specific transcription factor YABBY family protein (AT2G26580.1) scaffold00029:19194..23005 3
Ciunshiu_m02256.g gene: Elongation factor 2 (sp|O23755|EF2_BETVU) Ribosomal protein S5/Elongation factor G/III/V family protein (AT1G56070.3); TRANSLATION factor scaffold00029:191420..195758 3
Ciunshiu_m02295.g gene: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial (sp|Q9ZNX9|SIGE_ARATH) sigma factor E (AT5G24120.1); Homeodomain-like scaffold00029:672826..675397 3
Ciunshiu_m02300.g gene: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial (sp|Q9ZNX9|SIGE_ARATH) sigma factor E (AT5G24120.1); RNA POLYMERASE SIGMA factor RPO scaffold00029:674601..678823 3
Ciunshiu_m02352.g gene: Probable WRKY transcription factor 27 (sp|Q9FLX8|WRK27_ARATH) WRKY DNA-binding protein 27 (AT5G52830.1) scaffold00029:1091070..1092808 3
Ciunshiu_m00821.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) Homeodomain-like superfamily protein (AT1G14600.1) scaffold00046:501052..504146 3
Ciunshiu_m18184.g gene: Probable transcription factor KAN4 (sp|Q9FJV5|KAN4_ARATH) Homeodomain-like superfamily protein (AT5G42630.1) scaffold00009:208345..211915 3
Ciunshiu_m28400.g gene: Ethylene-responsive transcription factor RAP2-1 (sp|Q8LC30|RAP21_ARATH) related to AP2 1 (AT1G46768.1) scaffold00009:827500..828522 3
Ciunshiu_m18274.g gene: Ethylene-responsive transcription factor RAP2-1 (sp|Q8LC30|RAP21_ARATH) related to AP2 1 (AT1G46768.1) scaffold00009:827670..828164 3
Ciunshiu_m18269.g gene: Probable WRKY transcription factor 7 (sp|Q9STX0|WRKY7_ARATH) WRKY DNA-binding protein 7 (AT4G24240.1) scaffold00009:875702..877629 3
Ciunshiu_m18361.g gene: Erythroid differentiation-related factor 1 (sp|Q3B7T1|EDRF1_HUMAN) erythroid differentiation factor-like protein (AT1G35660.1) scaffold00009:1392692..1399357 3
Ciunshiu_m18371.g gene: Cleavage stimulating factor 64 (sp|Q9M9G6|CTF64_ARATH) cleavage stimulating factor 64 (AT1G71800.1); RNA-binding protein scaffold00009:1577903..1584190 3
Ciunshiu_m18448.g gene: Trihelix transcription factor GT-2 (sp|Q39117|TGT2_ARATH) Duplicated homeodomain-like superfamily protein (AT1G76880.1) scaffold00009:2121508..2124499 3
Ciunshiu_m18451.g gene: Trihelix transcription factor GT-2 (sp|Q39117|TGT2_ARATH) Duplicated homeodomain-like superfamily protein (AT1G76880.1) scaffold00009:2131902..2135163 3
Ciunshiu_m18460.g gene: Eukaryotic translation initiation factor 5B (sp|Q10251|IF2P_SCHPO) eukaryotic translation initiation factor 2 (eIF-2) family protein (AT1G76810.1); TRANSLATION factor scaffold00009:2191587..2198836 3
Ciunshiu_m00907.g gene: Cleavage and polyadenylation specificity factor subunit 2 (sp|Q9LKF9|CPSF2_ARATH) cleavage and polyadenylation specificity factor 100 (AT5G23880.1); CLEAVAGE AND POLYADENYLATION SPECIFICITY factor scaffold00013:302460..310517 3
Ciunshiu_m00913.g gene: Actin-depolymerizing factor 7 (sp|Q67ZM4|ADF7_ARATH) actin depolymerizing factor 7 (AT4G25590.2); ADF/Cofilin/Destrin scaffold00013:443674..444527 3
Ciunshiu_m00973.g gene: Ethylene-responsive transcription factor ERF026 (sp|Q9CAN9|ERF26_ARATH) Integrase-type DNA-binding superfamily protein (AT1G12630.1) scaffold00013:816902..817738 3
Ciunshiu_m01010.g gene: Trihelix transcription factor ASR3 (sp|Q8VZ20|ASR3_ARATH) Protein kinase superfamily protein (AT5G51800.1); RNA-binding protein scaffold00013:1121247..1124360 3
Ciunshiu_m01086.g gene: Heat stress transcription factor B-2b (sp|Q9T0D3|HFB2B_ARATH) jagunal-like protein (AT5G51510.1); Protein jagunal scaffold00013:1714561..1718229 3
Ciunshiu_m16056.g gene: Probable WRKY transcription factor 49 (sp|Q9FHR7|WRK49_ARATH) WRKY DNA-binding protein 49 (AT5G43290.1) scaffold00041:797041..798352 3
Ciunshiu_m16062.g gene: Scarecrow-like protein 9 (sp|O80933|SCL9_ARATH) GRAS family transcription factor (AT2G37650.2) scaffold00041:850539..852782 3
Ciunshiu_m16070.g gene: Transcription factor AS1 (sp|O80931|AS1_ARATH) myb-like HTH transcriptional regulator family protein (AT2G37630.1); MYB-LIKE DNA-binding protein MYB scaffold00041:986326..987378 3
Ciunshiu_m23838.g gene: Splicing factor U2af small subunit A (sp|Q9S709|U2AFA_ARATH) U2 snRNP auxiliary factor small subunit (AT1G27650.1); U2 auxiliary factor small subunit scaffold00051:716631..717605 3
Ciunshiu_m25438.g gene: Eukaryotic translation initiation factor 3 subunit L (sp|A7SDW5|EIF3L_NEMVE) RNA polymerase I-associated factor PAF67 (AT5G25754.1); Translation initiation factor 3 complex subunit L scaffold00044:199806..203623 3
Ciunshiu_m25083.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) Homeodomain-like superfamily protein (AT3G04030.3) scaffold00010:187207..189504 3
Ciunshiu_m25177.g gene: Elongation factor Ts, mitochondrial (sp|B9SEZ6|EFTS_RICCO) translation elongation factor Ts (EF-Ts) (AT4G11120.1); Translation elongation factor EFTs/EF1B scaffold00010:840882..845844 3
Ciunshiu_m25175.g gene: Cyclic dof factor 3 (sp|Q8LFV3|CDF3_ARATH) cycling DOF factor 2 (AT5G39660.3) scaffold00010:883652..887016 3
Ciunshiu_m25390.g gene: Pre-mRNA-splicing factor SLU7-A (sp|Q9SHY8|SLU7A_ARATH) Pre-mRNA splicing Prp18-interacting factor (AT1G65660.1); STEP II SPLICING factor SLU7 scaffold00010:2405805..2410530 3
Ciunshiu_m25377.g gene: Actin-depolymerizing factor (sp|Q8SAG3|ADF_VITVI) actin depolymerizing factor 6 (AT2G31200.1); ADF/Cofilin/Destrin scaffold00010:2452401..2454366 3
Ciunshiu_m05191.g gene: Trihelix transcription factor ASR3 (sp|Q8VZ20|ASR3_ARATH) hydroxyproline-rich glycoprotein family protein (AT1G31310.1); Myb_DNA-bind_4 scaffold00002:162228..163442 3
Ciunshiu_m05247.g gene: Probable WRKY transcription factor 14 (sp|Q9SA80|WRK14_ARATH) WRKY DNA-binding protein 14 (AT1G30650.1) scaffold00002:667619..670607 3
Ciunshiu_m05361.g gene: Auxin response factor 6 (sp|Q9ZTX8|ARFF_ARATH) auxin response factor 6 (AT1G30330.1) scaffold00002:1439053..1445945 3
Ciunshiu_m05436.g gene: Nuclear transport factor 2 (sp|Q9C7F5|NTF2_ARATH) NTF2-like protein (AT1G11570.3); NUCLEAR TRANSPORT factor 2 scaffold00002:1924029..1924667 3
Ciunshiu_m05458.g gene: Eukaryotic translation initiation factor-like protein (AT1G11480.2) scaffold00002:2164117..2171245 3
Ciunshiu_m05506.g gene: Transcription factor MYB39 (sp|Q8GWP0|MYB39_ARATH) MYB-like 102 (AT4G21440.1); MYB-LIKE DNA-binding protein MYB scaffold00002:2404445..2406083 3
Ciunshiu_m05554.g gene: NAC transcription factor 56 (sp|Q9LD44|NAC56_ARATH) NAC domain containing protein 2 (AT3G15510.1) scaffold00002:2787446..2789165 3
Ciunshiu_m05581.g gene: Splicing factor U2af large subunit A (sp|Q9ZR39|U2A2A_NICPL) U2 snRNP auxilliary factor, large subunit, splicing factor (AT1G60900.1); RNA-binding protein scaffold00002:2937430..2947230 3
Ciunshiu_m05607.g gene: Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G20970.1); Achaete-scute transcription factor-related scaffold00002:3158678..3161735 3
Ciunshiu_m05633.g gene: Ethylene-responsive transcription factor 12 (sp|Q94ID6|ERF81_ARATH) ERF domain protein 12 (AT1G28360.1) scaffold00002:3305224..3305730 3
Ciunshiu_m05644.g gene: Ethylene-responsive transcription factor 4 (sp|Q9LW49|ERF4_NICSY) erf domain protein 9 (AT5G44210.1) scaffold00002:3325326..3326051 3
Ciunshiu_m05652.g gene: Transcription factor VOZ1 (sp|Q9SGQ0|VOZ1_ARATH) vascular plant one zinc finger protein (AT1G28520.3) scaffold00002:3483561..3488286 3
Ciunshiu_m05670.g gene: Ethylene-responsive transcription factor ERF091 (sp|O49515|ERF91_ARATH) Integrase-type DNA-binding superfamily protein (AT5G61590.1) scaffold00002:3553368..3554255 3
Ciunshiu_m05709.g gene: Transcription initiation factor TFIID subunit, putative (DUF688) (AT1G29240.1); Protein of unknown function DUF688 scaffold00002:3885909..3889012 3
Ciunshiu_m05739.g gene: Probable WRKY transcription factor 65 (sp|Q9LP56|WRK65_ARATH) WRKY DNA-binding protein 65 (AT1G29280.1) scaffold00002:4053961..4057055 3
Ciunshiu_m17623.g gene: Increased DNA methylation 1 (sp|F4IXE7|IDM1_ARATH) PHD finger transcription factor (AT5G58610.9) scaffold00042:204955..207035 3
Ciunshiu_m01667.g gene: Eukaryotic translation initiation factor 4B2 (sp|Q9SAD7|IF4B2_ARATH) eukaryotic initiation factor 4B2 (AT1G13020.1); Plant specific eukaryotic initiation factor 4B scaffold00004:149339..155529 3
Ciunshiu_m01723.g gene: Axial regulator YABBY 4 (sp|Q9LDT3|YAB4_ARATH) Plant-specific transcription factor YABBY family protein (AT1G23420.2) scaffold00004:563615..567576 3
Ciunshiu_m01882.g gene: Probable WRKY transcription factor 72 (sp|Q9LXG8|WRK72_ARATH) WRKY DNA-binding protein 72 (AT5G15130.2) scaffold00004:1613315..1617508 3
Ciunshiu_m01894.g gene: Eukaryotic translation initiation factor 3 subunit H (sp|Q9C5Z2|EIF3H_ARATH) translation initiation factor 3 subunit H1 (AT1G10840.1); EUKARYOTIC TRANSLATION INITIATION factor 3 -related scaffold00004:1618624..1619643 3
Ciunshiu_m01942.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) Homeodomain-like superfamily protein (AT1G69580.1) scaffold00004:1961555..1963239 3
Ciunshiu_m27221.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) Homeodomain-like superfamily protein (AT1G69580.1) scaffold00004:1961555..1963749 3
Ciunshiu_m01932.g gene: Cyclic dof factor 3 (sp|Q8LFV3|CDF3_ARATH) cycling DOF factor 3 (AT3G47500.1) scaffold00004:1973988..1976206 3
Ciunshiu_m27218.g gene: Cyclic dof factor 3 (sp|Q8LFV3|CDF3_ARATH) cycling DOF factor 3 (AT3G47500.1) scaffold00004:1973988..1976335 3
Ciunshiu_m27223.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC-like, activated by AP3/PI (AT1G69490.1) scaffold00004:2048188..2049754 3
Ciunshiu_m01960.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC-like, activated by AP3/PI (AT1G69490.1) scaffold00004:2048474..2049754 3
Ciunshiu_m01995.g gene: Probable WRKY transcription factor 3 (sp|Q9ZQ70|WRKY3_ARATH) WRKY DNA-binding protein 4 (AT1G13960.1) scaffold00004:2243307..2247154 3
Ciunshiu_m01994.g gene: Eukaryotic translation initiation factor 5A-2 (sp|Q9AXQ5|IF5A2_SOLLC) eukaryotic elongation factor 5A-1 (AT1G13950.1); Translation elongation factor IF5A scaffold00004:2252558..2255314 3
Ciunshiu_m02000.g gene: T-box transcription factor, putative (DUF863) (AT1G69360.1); Protein of unknown function DUF863, plant scaffold00004:2288854..2294280 3
Ciunshiu_m02003.g gene: Probable WRKY transcription factor 57 (sp|Q9C983|WRK57_ARATH) WRKY DNA-binding protein 57 (AT1G69310.4) scaffold00004:2358105..2363415 3
Ciunshiu_m02095.g gene: Basic-leucine zipper (bZIP) transcription factor family protein (AT4G35040.2); Basic-leucine zipper domain scaffold00004:2802602..2803393 3
Ciunshiu_m02106.g gene: Auxin response factor 4 (sp|Q9ZTX9|ARFD_ARATH) auxin response factor 4 (AT5G60450.2) scaffold00004:2891268..2897290 3
Ciunshiu_m08326.g gene: ADP-ribosylation factor-like protein 2 (sp|Q9ZPX1|ARF5_ARATH) ADP-ribosylation factor family protein (AT2G18390.1); ADP RIBOSYLATION factor-related scaffold00036:141498..145077 3
Ciunshiu_m27655.g gene: Transcription factor DIVARICATA (sp|Q8S9H7|DIV_ANTMA) Duplicated homeodomain-like superfamily protein (AT5G08520.1) scaffold00036:524940..531293 3
Ciunshiu_m08385.g gene: Transcription factor DIVARICATA (sp|Q8S9H7|DIV_ANTMA) Duplicated homeodomain-like superfamily protein (AT5G08520.1) scaffold00036:525126..530912 3
Ciunshiu_m08392.g gene: Ethylene-responsive transcription factor ERF119 (sp|Q9LUA2|EF119_ARATH) Integrase-type DNA-binding superfamily protein (AT1G68550.1) scaffold00036:666312..668499 3
Ciunshiu_m08433.g gene: AP2/ERF and B3 domain-containing transcription repressor RAV2 (sp|P82280|RAV2_ARATH) AP2/B3 transcription factor family protein (AT1G25560.1) scaffold00036:973029..974147 3
Ciunshiu_m24676.g gene: Elongation factor G, putative (DUF668) (AT1G30755.1) scaffold00018:443122..448077 3
Ciunshiu_m24760.g gene: BZIP transcription factor 53 (sp|Q9LZP8|BZP53_ARATH) G-box binding factor 6 (AT4G34590.1); CAMP-RESPONSE element binding protein-related scaffold00018:1071994..1072488 3
Ciunshiu_m27959.g gene: Pre-mRNA-splicing factor SLU7-A (sp|Q9SHY8|SLU7A_ARATH) Pre-mRNA splicing Prp18-interacting factor (AT1G65660.1); STEP II SPLICING factor SLU7 scaffold00005:138554..139596 3
Ciunshiu_m12461.g gene: Pre-mRNA-splicing factor SLU7 (sp|Q5ZIG2|SLU7_CHICK) Pre-mRNA splicing Prp18-interacting factor (AT1G65660.1); STEP II SPLICING factor SLU7 scaffold00005:138670..139505 3
Ciunshiu_m12477.g gene: AP2-like ethylene-responsive transcription factor AIL5 (sp|Q6PQQ3|AIL5_ARATH) AINTEGUMENTA-like 5 (AT5G57390.1) scaffold00005:222566..226383 3
Ciunshiu_m12586.g gene: Auxin response factor 19 (sp|Q0D9R7|ARFS_ORYSJ) auxin response factor 19 (AT1G19220.1) scaffold00005:1001712..1009256 3
Ciunshiu_m12666.g gene: Eukaryotic initiation factor 4A-11 (sp|Q40465|IF411_TOBAC) eukaryotic translation initiation factor 4A1 (AT3G13920.1) scaffold00005:1669756..1673410 3
Ciunshiu_m27968.g gene: Eukaryotic initiation factor 4A-11 (sp|Q40465|IF411_TOBAC) eukaryotic translation initiation factor 4A1 (AT3G13920.1) scaffold00005:1669756..1673415 3
Ciunshiu_m12700.g gene: Probable WRKY transcription factor 50 (sp|Q8VWQ5|WRK50_ARATH) WRKY DNA-binding protein 50 (AT5G26170.1) scaffold00005:1788702..1789864 3
Ciunshiu_m12796.g gene: Eukaryotic translation initiation factor 3 subunit K (sp|Q94HF1|EIF3K_ORYSJ) eukaryotic translation initiation factor 3K (AT4G33250.1); Eukaryotic translation initiation factor 3 subunit K scaffold00005:2493892..2496722 3
Ciunshiu_m12800.g gene: Auxin response factor 19 (sp|Q8RYC8|ARFS_ARATH) auxin response factor 19 (AT1G19220.1) scaffold00005:2646890..2654662 3
Ciunshiu_m12804.g gene: Ethylene-responsive transcription factor ERF017 (sp|Q84QC2|ERF17_ARATH) Integrase-type DNA-binding superfamily protein (AT1G19210.1) scaffold00005:2660176..2660775 3
Ciunshiu_m12842.g gene: Scarecrow-like protein 18 (sp|Q9ZWC5|SCL18_ARATH) GRAS family transcription factor (AT1G55580.1) scaffold00005:2933498..2934871 3
Ciunshiu_m12847.g gene: Probable WRKY transcription factor 2 (sp|Q9FG77|WRKY2_ARATH) WRKY DNA-binding protein 2 (AT5G56270.1) scaffold00005:2975324..2979659 3
Ciunshiu_m12872.g gene: Zinc finger protein ZAT10 (sp|Q96289|ZAT10_ARATH) C2H2 type zinc finger transcription factor family (AT5G56200.1) scaffold00005:3023888..3025675 3
Ciunshiu_m12883.g gene: RNA polymerase II elongation factor (AT5G56120.1) scaffold00005:3117224..3117886 3
Ciunshiu_m12898.g gene: Probable RNA polymerase II transcription factor B subunit 1-1 (sp|Q3ECP0|TFB1A_ARATH) BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) (AT1G55750.1); TFIIH subunit Tfb1/p62 scaffold00005:3188227..3194125 3
Ciunshiu_m04133.g gene: Transcription factor GTE7 (sp|Q7Y214|GTE7_ARATH) DNA polymerase V family (AT5G64420.1); FALZ-related BROMOdomain-containing proteinS scaffold00031:13413..18268 3
Ciunshiu_m04140.g gene: MADS-box transcription factor 27 (sp|Q6EP49|MAD27_ORYSJ) AGAMOUS-like 16 (AT3G57230.5); MADS box protein scaffold00031:64319..65896 3
Ciunshiu_m04159.g gene: Actin-depolymerizing factor 5 (sp|Q9ZNT3|ADF5_ARATH) actin depolymerizing factor 5 (AT2G16700.4); ADF/Cofilin/Destrin scaffold00031:211737..213296 3
Ciunshiu_m04197.g gene: Translation initiation factor IF-3 (sp|A6Q167|IF3_NITSB) translation initiation factor 3 (IF-3) family protein (AT1G34360.1); Translation initiation factor 3 scaffold00031:531932..536385 3
Ciunshiu_m14054.g gene: Trihelix transcription factor GTL2 (sp|Q8H181|GTL2_ARATH) Duplicated homeodomain-like superfamily protein (AT5G28300.1) scaffold00024:1249978..1253002 3
Ciunshiu_m14056.g gene: Translation initiation factor IF-2 (sp|A9HF18|IF2_GLUDA) Translation initiation factor 2, small GTP-binding protein (AT4G11160.3); TRANSLATION factor scaffold00024:1258289..1263025 3
Ciunshiu_m17181.g gene: Transcription factor bHLH84 (sp|Q7XHI9|BH084_ARATH) ROOT HAIR DEFECTIVE 6-LIKE 2 (AT4G33880.1) scaffold00047:454998..456445 3
Ciunshiu_m17193.g gene: ADP-ribosylation factor-like protein 8A (sp|Q5ZKQ8|ARL8A_CHICK) ADP-ribosylation factor-like A1D (AT5G67560.1); ADP RIBOSYLATION factor-related scaffold00047:546593..549860 3
Ciunshiu_m09085.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC-like, activated by AP3/PI (AT1G69490.1) scaffold00045:9291..17569 3
Ciunshiu_m09080.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC-like, activated by AP3/PI (AT1G69490.1) scaffold00045:35129..40714 3
Ciunshiu_m09188.g gene: CDK-activating kinase assembly factor MAT1 (sp|P51949|MAT1_MOUSE) cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein (AT4G30820.27); Cdk-activating kinase assembly factor MAT1/Tfb3 scaffold00045:841850..845101 3
Ciunshiu_m20489.g gene: DELLA protein GAI1 (sp|Q8S4W7|GAI1_VITVI) GRAS family transcription factor family protein (AT2G01570.1) scaffold00022:254159..255670 3
Ciunshiu_m20604.g gene: Probable WRKY transcription factor 75 (sp|Q9FYA2|WRK75_ARATH) WRKY DNA-binding protein 75 (AT5G13080.1) scaffold00022:993619..996438 3
Ciunshiu_m20614.g gene: Ribosome maturation factor RimP (sp|Q8F7K3|RIMP_LEPIN) Uncharacterized protein family UPF0090 (AT1G69210.1); Ribosome maturation factor RimP scaffold00022:1145960..1148203 3
Ciunshiu_m20661.g gene: Protein CRABS CLAW (sp|Q8L925|CRC_ARATH) Plant-specific transcription factor YABBY family protein (AT1G69180.1) scaffold00022:1395197..1397040 3
Ciunshiu_m11520.g gene: Ethylene-responsive transcription factor ERF084 (sp|Q9M8M5|ERF84_ARATH) Integrase-type DNA-binding superfamily protein (AT1G80580.1) scaffold00016:183288..184274 3
Ciunshiu_m11660.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) Homeodomain-like superfamily protein (AT1G79430.2) scaffold00016:1635189..1637517 3
Ciunshiu_m04813.g gene: Eukaryotic translation initiation factor 3 subunit J (sp|Q6INR1|EIF3J_XENLA) Translation initiation factor eIF3 subunit (AT1G66070.1); Eukaryotic translation initiation factor 3 subunit J scaffold00043:469638..474020 3
Ciunshiu_m23479.g gene: Nodulin homeobox (sp|F4JI44|NDX_ARATH) sequence-specific DNA binding transcription factor ATNDX (AT4G03090.5); Homeobox domain scaffold00012:962258..970116 3
Ciunshiu_m23496.g gene: Auxin response factor 2 (sp|Q94JM3|ARFB_ARATH) auxin response factor 2 (AT5G62000.4) scaffold00012:1058621..1063605 3
Ciunshiu_m23515.g gene: Peptide chain release factor APG3, chloroplastic (sp|Q8RX79|APG3_ARATH) Peptide chain release factor 1 (AT3G62910.1); Peptide chain release factor 1 scaffold00012:1226066..1231724 3
Ciunshiu_m23542.g gene: Stress-related protein (sp|Q9SW70|SRP_VITRI) Rubber elongation factor protein (REF) (AT2G47780.1); Rubber elongation factor scaffold00012:1453397..1454436 3
Ciunshiu_m06628.g gene: Cyclin-B1-2 (sp|Q0DWQ7|CCB12_ORYSJ) Proteasome maturation factor UMP1 (AT5G38650.1); Proteasome maturation factor UMP1 scaffold00032:154566..157761 3
Ciunshiu_m27682.g gene: Protein STABILIZED1 (sp|Q9ZT71|STA1_ARATH) pre-mRNA splicing factor-like protein (AT4G03430.3); PRE-MRNA SPLICING factor scaffold00025:956993..965700 3
Ciunshiu_m08722.g gene: Protein STABILIZED1 (sp|Q9ZT71|STA1_ARATH) pre-mRNA splicing factor-like protein (AT4G03430.3); PRE-MRNA SPLICING factor scaffold00025:956999..965191 3
Ciunshiu_m24472.g gene: Eukaryotic peptide chain release factor subunit 1-3 (sp|P35614|ERF1Z_ARATH) eukaryotic release factor 1-3 (AT3G26618.1); Peptide chain release factor eRF1/aRF1 scaffold00034:56097..57903 3
Ciunshiu_m24541.g gene: Eukaryotic translation initiation factor isoform 4E-2 (sp|Q03389|IF4E2_WHEAT) Eukaryotic initiation factor 4E protein (AT5G35620.1); Translation Initiation factor eIF- 4e scaffold00034:1149895..1152740 3
Ciunshiu_m21348.g gene: Eukaryotic translation initiation factor 4E-1 (sp|O23252|IF4E1_ARATH) Eukaryotic initiation factor 4E protein (AT1G29550.1); Translation Initiation factor eIF- 4e scaffold00003:12681..14852 3
Ciunshiu_m21353.g gene: Probable WRKY transcription factor 28 (sp|Q8VWJ2|WRK28_ARATH) WRKY DNA-binding protein 28 (AT4G18170.1) scaffold00003:174297..175581 3
Ciunshiu_m21467.g gene: Probable WRKY transcription factor 31 (sp|Q93WT0|WRK31_ARATH) WRKY DNA-binding protein 31 (AT4G22070.1) scaffold00003:811905..814855 3
Ciunshiu_m21477.g gene: Probable transcription repressor OFP9 (sp|P0DKG3|OFP9_ARATH) transcription repressor (AT4G04025.1); Ovate protein family, C-terminal scaffold00003:985409..986294 3
Ciunshiu_m21566.g gene: Trihelix transcription factor GTL1 (sp|Q9C882|GTL1_ARATH) Homeodomain-like superfamily protein (AT5G47660.1) scaffold00003:1392242..1394511 3
Ciunshiu_m21598.g gene: Myb family transcription factor APL (sp|Q9SAK5|APL_ARATH) Homeodomain-like superfamily protein (AT4G13640.1) scaffold00003:1502740..1505279 3
Ciunshiu_m21701.g gene: Probable WRKY transcription factor 48 (sp|Q9FGZ4|WRK48_ARATH) WRKY DNA-binding protein 48 (AT5G49520.1) scaffold00003:2374045..2375761 3
Ciunshiu_m21722.g gene: Transcription factor UPBEAT1 (sp|O22901|BH151_ARATH); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00003:2391702..2391962 3
Ciunshiu_m21740.g gene: DELLA protein RGL2 (sp|Q8GXW1|RGL2_ARATH) GRAS family transcription factor family protein (AT2G01570.1) scaffold00003:2594481..2596463 3
Ciunshiu_m21749.g gene: Calmodulin-binding transcription activator 5 (sp|O23463|CMTA5_ARATH) calmodulin-binding transcription activator 5 (AT4G16150.1); CALMODULIN-binding TRANSCRIPTION ACTIVATOR (CAMTA) scaffold00003:2681310..2689589 3
Ciunshiu_m21805.g gene: Ethylene-responsive transcription factor RAP2-3 (sp|P42736|RAP23_ARATH) ethylene-responsive element binding protein (AT3G16770.1) scaffold00003:3038442..3039982 3
Ciunshiu_m21845.g gene: Eukaryotic translation initiation factor 2 subunit 3 (sp|P81795|IF2G_RAT) eukaryotic translation initiation factor 2 gamma subunit (AT1G04170.2); TRANSLATION factor scaffold00003:3318739..3323125 3
Ciunshiu_m21878.g gene: Flowering-promoting factor 1-like protein 3 (sp|Q0E1D7|FLP3_ORYSJ) flowering promoting factor 1 (AT5G24860.1) scaffold00003:3501232..3501555 3
Ciunshiu_m21898.g gene: Ethylene-responsive transcription factor ERF086 (sp|Q6J9Q2|ERF86_ARATH) Integrase-type DNA-binding superfamily protein (AT5G18560.1) scaffold00003:3769589..3770617 3
Ciunshiu_m22344.g gene: Scarecrow-like protein 4 (sp|Q9FL03|SCL4_ARATH) GRAS family transcription factor (AT5G66770.1) scaffold00017:1020565..1022052 3
Ciunshiu_m22359.g gene: Scarecrow-like protein 15 (sp|O23210|SCL15_ARATH) GRAS family transcription factor (AT4G36710.1) scaffold00017:1238667..1240400 3
Ciunshiu_m15566.g gene: E2F transcription factor-like E2FE (sp|Q8LSZ4|E2FE_ARATH) DP-E2F-like 1 (AT3G48160.2); E2F Family scaffold00008:369255..372217 3
Ciunshiu_m15568.g gene: Serine/arginine-rich splicing factor (AT3G48120.1) scaffold00008:381369..384500 3
Ciunshiu_m15624.g gene: Probable WRKY transcription factor 72 (sp|Q9LXG8|WRK72_ARATH) WRKY DNA-binding protein 61 (AT1G18860.1) scaffold00008:829723..833047 3
Ciunshiu_m15645.g gene: Transcription factor PRE6 (sp|Q8GW32|PRE6_ARATH); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00008:922660..923459 3
Ciunshiu_m15652.g gene: Transcription factor TCP14 (sp|Q93Z00|TCP14_ARATH) TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (AT3G47620.1) scaffold00008:958672..959952 3
Ciunshiu_m15674.g gene: Actin-depolymerizing factor 1 (sp|Q6EUH7|ADF1_ORYSJ) actin depolymerizing factor 11 (AT1G01750.2); ADF/Cofilin/Destrin scaffold00008:1105201..1105697 3
Ciunshiu_m15745.g gene: WRKY transcription factor 22 (sp|O04609|WRK22_ARATH) WRKY DNA-binding protein 27 (AT5G52830.1) scaffold00008:1596886..1598068 3
Ciunshiu_m15809.g gene: Ethylene-responsive transcription factor ERF061 (sp|Q9C7W2|ERF61_ARATH) Integrase-type DNA-binding superfamily protein (AT1G64380.1) scaffold00008:2040278..2041216 3
Ciunshiu_m28209.g gene: Auxin response factor 9 (sp|Q9XED8|ARFI_ARATH) auxin response factor 9 (AT4G23980.2) scaffold00008:2279242..2283602 3
Ciunshiu_m26592.g gene: Eukaryotic translation initiation factor 2 subunit beta (sp|P55871|IF2B_MALDO) eukaryotic translation initiation factor 2 beta subunit (AT5G20920.3); EUKARYOTIC TRANSLATION INITIATION factor scaffold00050:598524..602420 3
Ciunshiu_m03573.g gene: Elongation factor 1-delta (sp|P93447|EF1D_PIMBR) translation elongation factor EF1B/ribosomal protein S6 family protein (AT1G30230.1); ELONGATION factor 1-BETA scaffold00023:112346..114766 3
Ciunshiu_m03586.g gene: Scarecrow-like protein 15 (sp|O23210|SCL15_ARATH) GRAS family transcription factor (AT4G36710.1) scaffold00023:246413..248029 3
Ciunshiu_m03619.g gene: Probable WRKY transcription factor 40 (sp|Q9SAH7|WRK40_ARATH) WRKY DNA-binding protein 40 (AT1G80840.1) scaffold00023:545164..546959 3
Ciunshiu_m03617.g gene: Probable WRKY transcription factor 40 (sp|Q9SAH7|WRK40_ARATH) WRKY DNA-binding protein 40 (AT1G80840.1) scaffold00023:554959..556874 3
Ciunshiu_m03647.g gene: Eukaryotic translation initiation factor 3 subunit B (sp|P56821|EIF3B_TOBAC) translation initiation factor 3B1 (AT5G27640.3); Eukaryotic translation initiation factor 3 subunit B scaffold00023:737730..742671 3
Ciunshiu_m03688.g gene: Probable WRKY transcription factor 17 (sp|Q9SJA8|WRK17_ARATH) WRKY DNA-binding protein 17 (AT2G24570.1) scaffold00023:1064500..1066819 3
Ciunshiu_m03753.g gene: Ras guanine nucleotide exchange factor K (AT2G21080.1) scaffold00023:1412211..1414078 3
Ciunshiu_m02517.g gene: Homeobox protein HD1 (sp|P46606|HD1_BRANA) homeobox knotted-like protein (AT1G62990.1); HOMEObox protein TRANSCRIPTION factorS scaffold00020:42638..44644 3
Ciunshiu_m27262.g gene: Homeobox protein HD1 (sp|P46606|HD1_BRANA) homeobox knotted-like protein (AT1G62990.1); HOMEObox protein TRANSCRIPTION factorS scaffold00020:42638..48183 3
Ciunshiu_m02531.g gene: Growth-regulating factor 12 (sp|Q6AWX7|GRF12_ORYSJ) growth-regulating factor 2 (AT4G37740.1) scaffold00020:213086..214449 3
Ciunshiu_m02562.g gene: Glycine-rich protein (AT4G22740.1); MYELOID LEUKEMIA factor scaffold00020:470183..473463 3
Ciunshiu_m02624.g gene: Scarecrow-like protein 6 (sp|O81316|SCL6_ARATH) GRAS family transcription factor (AT4G00150.1) scaffold00020:986528..988909 3
Ciunshiu_m27272.g gene: Scarecrow-like protein 6 (sp|O81316|SCL6_ARATH) GRAS family transcription factor (AT4G00150.1) scaffold00020:986528..990131 3
Ciunshiu_m27274.g gene: Ethylene-responsive transcription factor ERF038 (sp|Q9ZQP3|ERF38_ARATH) ERF family protein 38 (AT2G35700.1) scaffold00020:1322907..1325555 3
Ciunshiu_m02666.g gene: Ethylene-responsive transcription factor ERF038 (sp|Q9ZQP3|ERF38_ARATH) ERF family protein 38 (AT2G35700.1) scaffold00020:1324689..1325435 3
Ciunshiu_m22621.g gene: Probable CCR4-associated factor 1 homolog 1 (sp|Q9SHJ0|CAF1A_ARATH); CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT scaffold00021:560175..561770 3
Ciunshiu_m22610.g gene: ADP-ribosylation factor-like protein 8B (sp|Q66HA6|ARL8B_RAT) ADP-ribosylation factor-like A1A (AT5G37680.1); ADP RIBOSYLATION factor-related scaffold00021:565935..569343 3
Ciunshiu_m22630.g gene: DELLA protein GAI (sp|Q84TQ7|GAI_GOSHI) GRAS family transcription factor family protein (AT1G14920.1) scaffold00021:687798..689528 3
Ciunshiu_m22762.g gene: Transcription factor AS1 (sp|O80931|AS1_ARATH) myb-like HTH transcriptional regulator family protein (AT2G37630.1); MYB-LIKE DNA-binding protein MYB scaffold00021:1571799..1572974 3
Ciunshiu_m25632.g gene: Ethylene-responsive transcription factor ERF023 (sp|Q1ECI2|ERF23_ARATH) Integrase-type DNA-binding superfamily protein (AT1G01250.1) scaffold00030:207984..208556 3
Ciunshiu_m25630.g gene: Auxin response factor 11 (sp|Q9ZPY6|ARFK_ARATH) auxin response factor 18 (AT3G61830.2) scaffold00030:227800..232482 3
Ciunshiu_m25680.g gene: GRF1-interacting factor 2 (sp|Q9MAL9|GIF2_ARATH) scaffold00030:525375..529586 3
Ciunshiu_m25704.g gene: Elongation factor Ts, mitochondrial (sp|Q5XF75|EFTS_ARATH) scaffold00030:735332..736467 3
Ciunshiu_m07991.g gene: Nodulation-signaling pathway 1 protein (sp|Q4VYC8|NSP1_MEDTR) GRAS family transcription factor (AT3G13840.1) scaffold00007:347758..349443 3
Ciunshiu_m07982.g gene: Growth-regulating factor 5 (sp|Q8L8A6|GRF5_ARATH) growth-regulating factor 5 (AT3G13960.1) scaffold00007:381839..383759 3
Ciunshiu_m08002.g gene: B-block binding subunit of TFIIIC (AT1G17450.3); GENERAL TRANSCRIPTION factor 3C POLYPEPTIDE 1 scaffold00007:424541..437096 3
Ciunshiu_m08035.g gene: Eukaryotic initiation factor 4A-8 (sp|P41381|IF4A8_TOBAC) eukaryotic translation initiation factor 4A1 (AT3G13920.1) scaffold00007:693857..696835 3
Ciunshiu_m08037.g gene: EPIDERMAL PATTERNING FACTOR-like protein 3 (sp|C4B8C4|EPFL3_ARATH) EPIDERMAL PATTERNING FACTOR-like protein (AT3G13898.1) scaffold00007:720273..721127 3
Ciunshiu_m08117.g gene: Translation factor GUF1 homolog, chloroplastic (sp|A5B4D2|GUFP_VITVI) Small GTP-binding protein (AT5G08650.1); TRANSLATION factor scaffold00007:1372477..1384549 3
Ciunshiu_m08171.g gene: EPIDERMAL PATTERNING FACTOR-like protein 1 (sp|Q9LFT5|EPFL1_ARATH) EPIDERMAL PATTERNING FACTOR-like protein (AT5G10310.1) scaffold00007:1757522..1758281 3
Ciunshiu_m08248.g gene: AP2-like ethylene-responsive transcription factor AIL6 (sp|Q52QU2|AIL6_ARATH) AINTEGUMENTA-like 6 (AT5G10510.2) scaffold00007:2316887..2321251 3
Ciunshiu_m08277.g gene: Peroxisome biogenesis factor 10 (sp|Q9SYU4|PEX10_ARATH) peroxin 10 (AT2G26350.1); Peroxisome biogenesis factor 10 scaffold00007:2527947..2531439 3
Ciunshiu_m05901.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC-like, activated by AP3/PI (AT1G69490.1) scaffold00037:424742..426210 3
Ciunshiu_m05906.g gene: NAC transcription factor 29 (sp|O49255|NAC29_ARATH) NAC domain containing protein 3 (AT3G15500.1) scaffold00037:427580..429242 3
Ciunshiu_m11717.g gene: Protein translation factor SUI1 homolog 1 (sp|P41568|SUI11_ARATH) Translation initiation factor SUI1 family protein (AT5G54940.1); EUKARYOTIC TRANSLATION INITIATION factor SUI1 scaffold00033:47292..47630 3
Ciunshiu_m11709.g gene: Protein translation factor SUI1 homolog (sp|O82569|SUI1_PIMBR) Translation initiation factor SUI1 family protein (AT5G54940.3) scaffold00033:47301..47734 3
Ciunshiu_m11736.g gene: Probable WRKY transcription factor 31 (sp|Q93WT0|WRK31_ARATH) WRKY DNA-binding protein 31 (AT4G22070.4) scaffold00033:298327..301075 3
Ciunshiu_m11743.g gene: Auxin response factor 18 (sp|Q653H7|ARFR_ORYSJ) auxin response factor 16 (AT4G30080.1) scaffold00033:437570..440894 3
Ciunshiu_m13748.g gene: Ethylene-responsive transcription factor ERF114 (sp|Q9FH54|EF114_ARATH) Integrase-type DNA-binding superfamily protein (AT5G61890.1) scaffold00055:633439..634216 3
Ciunshiu_m18730.g gene: Translation initiation factor IF-2 (sp|Q82K53|IF2_STRAW) scaffold00001:152158..156565 3
Ciunshiu_m18744.g gene: Transcription factor bHLH140 (sp|Q9M041|BH140_ARATH) APRATAXIN-like protein (AT5G01310.1); Histidine triad (HIT) protein scaffold00001:237755..241825 3
Ciunshiu_m18794.g gene: Probable WRKY transcription factor 33 (sp|Q8S8P5|WRK33_ARATH) WRKY DNA-binding protein 33 (AT2G38470.1) scaffold00001:627136..630421 3
Ciunshiu_m18868.g gene: Eukaryotic translation initiation factor 2 subunit beta (sp|O24473|IF2B_WHEAT) eukaryotic translation initiation factor 2 beta subunit (AT5G20920.3); EUKARYOTIC TRANSLATION INITIATION factor scaffold00001:1235690..1236586 3
Ciunshiu_m28433.g gene: Eukaryotic translation initiation factor 2 subunit beta (sp|O24473|IF2B_WHEAT) eukaryotic translation initiation factor 2 beta subunit (AT5G20920.3); EUKARYOTIC TRANSLATION INITIATION factor scaffold00001:1235721..1236586 3
Ciunshiu_m18884.g gene: Heat-inducible transcription repressor (AT5G01970.2); Uncharacterized scaffold00001:1363307..1366457 3
Ciunshiu_m18951.g gene: Scarecrow-like protein 23 (sp|Q9FHZ1|SCL23_ARATH) GRAS family transcription factor (AT5G41920.1) scaffold00001:1851512..1852786 3
Ciunshiu_m19091.g gene: Serine/arginine-rich SC35-like splicing factor SCL33 (sp|Q9SEU4|SRC33_ARATH) SC35-like splicing factor 33 (AT1G55310.4); SERINE/ARGININE RICH SPLICING factor scaffold00001:2836927..2840466 3
Ciunshiu_m19197.g gene: Increased DNA methylation 1 (sp|F4IXE7|IDM1_ARATH) PHD finger transcription factor (AT5G58610.3) scaffold00001:3772416..3774485 3
Ciunshiu_m19307.g gene: Growth-regulating factor 3 (sp|Q9SJR5|GRF3_ARATH) growth-regulating factor 3 (AT2G36400.1) scaffold00001:4434323..4436625 3
Ciunshiu_m19312.g gene: Ethylene-responsive transcription factor ERF024 (sp|Q9SJR0|ERF24_ARATH) Integrase-type DNA-binding superfamily protein (AT2G36450.1) scaffold00001:4503504..4504136 3
Ciunshiu_m19309.g gene: Trihelix transcription factor PTL (sp|Q9LZS0|PTL_ARATH) Duplicated homeodomain-like superfamily protein (AT5G03680.1) scaffold00001:4518862..4521569 3
Ciunshiu_m19325.g gene: Splicing factor U2af small subunit B (sp|Q9FMY5|U2AFB_ARATH) U2 snRNP auxiliary factor small subunit (AT1G27650.1); U2 auxiliary factor small subunit scaffold00001:4617031..4619625 3
Ciunshiu_m19372.g gene: Auxin response factor 8 (sp|Q9FGV1|ARFH_ARATH) auxin response factor 8 (AT5G37020.1) scaffold00001:4954115..4962831 3
Ciunshiu_m11138.g gene: Transcription factor bHLH145 (sp|Q9FGB0|BH145_ARATH); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00014:373380..374498 3
Ciunshiu_m11231.g gene: Ethylene-responsive transcription factor RAP2-4 (sp|Q8H1E4|RAP24_ARATH) related to AP2 4 (AT1G78080.1) scaffold00014:1092304..1093413 3
Ciunshiu_m11273.g gene: Auxin response factor 17 (sp|Q84WU6|ARFQ_ARATH) auxin response factor 17 (AT1G77850.1) scaffold00014:1419054..1423573 3
Ciunshiu_m11304.g gene: Nodulation-signaling pathway 2 protein (sp|Q5NE24|NSP2_MEDTR) GRAS family transcription factor (AT4G08250.1) scaffold00014:1738898..1740391 3
Ciunshiu_m11312.g gene: Ethylene-responsive transcription factor ERF013 (sp|Q9CAP4|ERF13_ARATH) Integrase-type DNA-binding superfamily protein (AT1G77640.1) scaffold00014:1782739..1783473 3
Ciunshiu_m01527.g gene: E2F transcription factor-like E2FF (sp|Q8RWL0|E2FF_ARATH) DP-E2F-like 1 (AT3G48160.2); E2F Family scaffold00035:85831..88936 3
Ciunshiu_m23133.g gene: Actin-depolymerizing factor 2 (sp|Q9FVI1|ADF2_PETHY) actin depolymerizing factor 4 (AT5G59890.2); ADF/Cofilin/Destrin scaffold00028:175163..177434 3
Ciunshiu_m23243.g gene: Rho guanine nucleotide exchange factor (AT1G49290.1) scaffold00028:953937..955091 3
Ciunshiu_m15121.g gene: Probable WRKY transcription factor 35 (sp|O64747|WRK35_ARATH) WRKY DNA-binding protein 35 (AT2G34830.1) scaffold00026:10913..12538 3
Ciunshiu_m15151.g gene: Transcription factor UPBEAT1 (sp|O22901|BH151_ARATH); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00026:192731..193587 3
Ciunshiu_m15145.g gene: Probable WRKY transcription factor 23 (sp|O22900|WRK23_ARATH) WRKY DNA-binding protein 23 (AT2G47260.1) scaffold00026:202523..204468 3
Ciunshiu_m15170.g gene: ADP-ribosylation factor 2 (sp|P51823|ARF2_ORYSJ) ADP-ribosylation factor A1B (AT5G14670.1) scaffold00026:329892..332544 3
Ciunshiu_m17879.g gene: Transcription factor bHLH128 (sp|Q8H102|BH128_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G05805.1) scaffold00048:445033..451752 2
Ciunshiu_m11949.g gene: AP2-like ethylene-responsive transcription factor At1g16060 (sp|Q94AN4|AP2L1_ARATH) ARIA-interacting double AP2 domain protein (AT1G16060.4) scaffold00052:622056..625587 2
Ciunshiu_m16759.g gene: Lachrymatory-factor synthase (sp|P59082|LFS_ALLCE); START-like domain scaffold00011:191652..193204 2
Ciunshiu_m16830.g gene: Transcription factor bHLH51 (sp|Q9XEF0|BH051_ARATH) basic helix-loop-helix 32 (AT3G25710.1); STEROL regulatory element-binding protein scaffold00011:789640..790663 2
Ciunshiu_m16829.g gene: Transcription factor MYB44 (sp|Q9FDW1|MYB44_ARATH) myb domain protein 70 (AT2G23290.1); MYB-LIKE DNA-binding protein MYB scaffold00011:796036..796893 2
Ciunshiu_m16848.g gene: Eukaryotic translation initiation factor 2 subunit alpha (sp|P56286|IF2A_SCHPO) Eukaryotic translation initiation factor 2 subunit 1 (AT2G40290.1); EUKARYOTIC TRANSLATION INITIATION factor 2 SUBUNIT 1 scaffold00011:928168..931454 2
Ciunshiu_m13519.g gene: DNA replication licensing factor MCM6 (sp|F4KAB8|MCM6_ARATH) minichromosome maintenance (MCM2/3/5) family protein (AT5G44635.2); DNA replication licensing factor scaffold00039:69259..74057 2
Ciunshiu_m13550.g gene: PAX3- and PAX7-binding protein 1 (sp|Q9Y5B6|PAXB1_HUMAN) GC-rich sequence DNA-binding factor-like protein (AT5G08550.1); GC-rich sequence DNA-binding factor scaffold00039:344786..349367 2
Ciunshiu_m13595.g gene: Transcription factor BEE 3 (sp|Q8GWK7|BEE3_ARATH) BR enhanced expression 3 (AT1G73830.1); STEROL regulatory element-binding protein scaffold00039:596892..598606 2
Ciunshiu_m13589.g gene: Transcription factor MYB108 (sp|Q9LDE1|MY108_ARATH) myb domain protein 62 (AT1G68320.1); MYB-LIKE DNA-binding protein MYB scaffold00039:608432..609939 2
Ciunshiu_m26272.g gene: Flowering-promoting factor 1-like protein 1 (sp|Q5Q0B3|FLP1_ARATH) flowering-promoting factor-like protein (AT4G31380.1) scaffold00006:1380520..1380936 2
Ciunshiu_m26312.g gene: Sec14 cytosolic factor (sp|Q10137|SEC14_SCHPO) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (AT3G46450.2); RETINALDEHYDE binding protein-related scaffold00006:1667380..1671729 2
Ciunshiu_m26342.g gene: Transcription factor MYB59 (sp|Q4JL84|MYB59_ARATH) myb domain protein 48 (AT3G46130.1); MYB-LIKE DNA-binding protein MYB scaffold00006:1839819..1841250 2
Ciunshiu_m26378.g gene: Nuclear factor related to kappa-B-binding protein (sp|Q6P4R8|NFRKB_HUMAN) nuclear factor kappa-B-binding-like protein (AT3G45830.1); Nuclear factor related to kappa-B-binding protein scaffold00006:2037315..2041388 2
Ciunshiu_m26414.g gene: CCR4-NOT transcription complex subunit 4 (sp|Q8BT14|CNOT4_MOUSE) RNA binding (RRM/RBD/RNP motifs) family protein (AT3G45630.1); CCR4-NOT TRANSCRIPTION COMPLEX related scaffold00006:2282986..2290944 2
Ciunshiu_m10512.g gene: Cellulose synthase-like protein E1 (sp|Q8VZK9|CSLE1_ARATH) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:673061..676859 2
Ciunshiu_m27808.g gene: Cellulose synthase-like protein E1 (sp|Q8VZK9|CSLE1_ARATH) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:673061..687605 2
Ciunshiu_m10514.g gene: Cellulose synthase-like protein E1 (sp|Q8VZK9|CSLE1_ARATH) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:680130..683736 2
Ciunshiu_m10513.g gene: Cellulose synthase-like protein E1 (sp|Q8VZK9|CSLE1_ARATH) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:688440..692565 2
Ciunshiu_m10506.g gene: Cellulose synthase-like protein E6 (sp|Q651X6|CSLE6_ORYSJ) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:710847..715344 2
Ciunshiu_m10509.g gene: Cellulose synthase-like protein E6 (sp|Q651X6|CSLE6_ORYSJ) cellulose synthase like E1 (AT1G55850.1); X-box TRANSCRIPTION factor-related scaffold00040:728680..733111 2
Ciunshiu_m10527.g gene: Pre-mRNA-splicing factor cwc15 (sp|Q5B020|CWC15_EMENI) Cwf15 / Cwc15 cell cycle control family protein (AT3G13200.1); Pre-mRNA-splicing factor Cwf15/Cwc15 scaffold00040:875426..878654 2
Ciunshiu_m10214.g gene: RNA polymerase sigma factor sigB (sp|O22056|SIGB_ARATH) RNApolymerase sigma subunit 2 (AT1G08540.1); RNA POLYMERASE SIGMA factor RPO scaffold00019:43796..48514 2
Ciunshiu_m10208.g gene: Upstream activation factor subunit UAF30 (sp|Q08747|UAF30_YEAST) SWIB/MDM2 domain superfamily protein (AT3G03590.1); BRG-1 ASSOCIATED factor 60 (BAF60) scaffold00019:49525..52252 2
Ciunshiu_m10209.g gene: Nuclear factor 1 A-type protein (DUF1005) (AT5G17640.1) scaffold00019:74665..78493 2
Ciunshiu_m10327.g gene: Pre-mRNA-processing protein 40C (sp|Q9LT25|PR40C_ARATH) pre-mRNA-processing protein 40C (AT3G19840.1); TRANSCRIPTION factor CA150B related\TCERG1 scaffold00019:1133079..1146665 2
Ciunshiu_m14170.g gene: Transcription factor UNE10 (sp|Q8GZ38|UNE10_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G00050.2); STEROL regulatory element-binding protein scaffold00015:422571..427790 2
Ciunshiu_m14315.g gene: LIM domain-containing protein PLIM2b (sp|Q1ECF5|PLI2B_ARATH) GATA type zinc finger transcription factor family protein (AT1G01780.1) scaffold00015:1356454..1357661 2
Ciunshiu_m14346.g gene: Transcription factor GLABRA 3 (sp|Q9FN69|GL3_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G41315.1); MYC scaffold00015:1498022..1501647 2
Ciunshiu_m14345.g gene: Rop guanine nucleotide exchange factor 2 (sp|Q9LQ89|ROGF2_ARATH) RHO guanyl-nucleotide exchange factor 2 (AT1G01700.1); PRONE domain scaffold00015:1512939..1515619 2
Ciunshiu_m14354.g gene: Mediator of RNA polymerase II transcription subunit 12 (sp|H3K2Y6|MED12_ARATH) RNA polymerase II transcription mediator (AT4G00450.1); SUPPRESSOR OF RNA POLYMERASE B SRB8-related scaffold00015:1519680..1531965 2
Ciunshiu_m07034.g gene: Transcription factor MYB86 (sp|Q8LPH6|MYB86_ARATH) myb domain protein 55 (AT4G01680.2); MYB-LIKE DNA-binding protein MYB scaffold00038:384495..386178 2
Ciunshiu_m07077.g gene: Homeobox protein knotted-1-like 6 (sp|Q84JS6|KNAT6_ARATH) homeobox protein knotted-1-like 6 (AT1G23380.1); HOMEObox protein TRANSCRIPTION factorS scaffold00038:624551..630364 2
Ciunshiu_m07087.g gene: Transcription factor MYB98 (sp|Q9S7L2|MYB98_ARATH) myb domain protein 98 (AT4G18770.1); MYB-LIKE DNA-binding protein MYB scaffold00038:703373..704934 2
Ciunshiu_m02307.g gene: Transcription factor SPEECHLESS (sp|Q700C7|SPCH_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G53210.1); MYC scaffold00029:690281..693080 2
Ciunshiu_m02319.g gene: Ubiquitin-associated/translation elongation factor EF1B protein (AT5G53330.1); UBA-like scaffold00029:787289..790048 2
Ciunshiu_m18186.g gene: B3 domain-containing protein REM16 (sp|Q8RYD1|REM16_ARATH) AP2/B3-like transcriptional factor family protein (AT4G33280.1) scaffold00009:223530..226690 2
Ciunshiu_m18196.g gene: Transcription factor MYB44 (sp|Q9FDW1|MYB44_ARATH) myb domain protein 77 (AT3G50060.1); MYB-LIKE DNA-binding protein MYB scaffold00009:334158..334922 2
Ciunshiu_m18212.g gene: B3 domain-containing protein At3g19184 (sp|Q1G3M3|Y3918_ARATH) AP2/B3-like transcriptional factor family protein (AT5G42700.1) scaffold00009:520786..523501 2
Ciunshiu_m18256.g gene: Transcription factor HEC1 (sp|Q9FHA7|HEC1_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G67060.1); STEROL regulatory element-binding protein scaffold00009:705151..705969 2
Ciunshiu_m18255.g gene: Transcription factor bHLH95 (sp|Q9FXA3|BH095_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G49770.1); MYC scaffold00009:774260..777029 2
Ciunshiu_m18253.g gene: Transcription factor SPATULA (sp|Q9FUA4|SPT_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G36930.1); STEROL regulatory element-binding protein scaffold00009:779178..781924 2
Ciunshiu_m18280.g gene: Transcription factor MYB44 (sp|Q9FDW1|MYB44_ARATH) myb domain protein r1 (AT5G67300.1); MYB-LIKE DNA-binding protein MYB scaffold00009:968531..969439 2
Ciunshiu_m18295.g gene: Transcription factor bHLH81 (sp|Q9M0R0|BH081_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G35460.1) scaffold00009:1060543..1064855 2
Ciunshiu_m18446.g gene: Cellulose synthase A catalytic subunit 2 [UDP-forming] (sp|O48947|CESA2_ARATH) cellulose synthase A2 (AT4G39350.1); X-box TRANSCRIPTION factor-related scaffold00009:1990967..1998169 2
Ciunshiu_m18490.g gene: Uncharacterized protein family UPF0090 (AT1G77122.1); Ribosome maturation factor RimP scaffold00009:2433990..2436800 2
Ciunshiu_m00939.g gene: Transcription factor MYB34 (sp|O64399|MYB34_ARATH) myb domain protein 17 (AT3G61250.1); MYB-LIKE DNA-binding protein MYB scaffold00013:518084..519647 2
Ciunshiu_m00940.g gene: Transcription factor LAF1 (sp|Q9M0K4|LAF1_ARATH) myb domain protein 19 (AT5G52260.1); MYB-LIKE DNA-binding protein MYB scaffold00013:527724..529977 2
Ciunshiu_m27150.g gene: Pre-mRNA cleavage factor Im 25 kDa subunit 2 (sp|Q8GXS3|CFIS2_ARATH) Cleavage/polyadenylation specificity factor, 25kDa subunit (AT4G25550.1); Cleavage/polyadenylation specificity factor subunit 5 scaffold00013:540140..543401 2
Ciunshiu_m00938.g gene: Pre-mRNA cleavage factor Im 25 kDa subunit 2 (sp|Q8GXS3|CFIS2_ARATH) Cleavage/polyadenylation specificity factor, 25kDa subunit (AT4G25550.1); Cleavage/polyadenylation specificity factor subunit 5 scaffold00013:540640..543401 2
Ciunshiu_m00952.g gene: ADP-ribosylation factor-related protein 1 (sp|Q63055|ARFRP_RAT) GTP-binding protein 1 (AT5G52210.2); ADP RIBOSYLATION factor-related scaffold00013:600924..604858 2
Ciunshiu_m00966.g gene: Serine/arginine-rich splicing factor RS41 (sp|P92966|SRS41_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT5G52040.2); SPLICING factor, ARGININE/SERINE-rich scaffold00013:775248..779937 2
Ciunshiu_m01051.g gene: Cleavage and polyadenylation specificity factor subunit 1 (sp|Q9FGR0|CPSF1_ARATH) cleavage and polyadenylation specificity factor 160 (AT5G51660.4); DNA REPAIR/RNA PROCESSING CPSF family scaffold00013:1406816..1429002 2
Ciunshiu_m01097.g gene: Transcription factor bHLH130 (sp|Q66GR3|BH130_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G51140.1) scaffold00013:1813628..1816649 2
Ciunshiu_m23737.g gene: Rop guanine nucleotide exchange factor 1 (sp|Q93ZY2|ROGF1_ARATH) rho guanyl-nucleotide exchange factor 1 (AT4G38430.1); PRONE domain scaffold00051:40590..43469 2
Ciunshiu_m23854.g gene: Probable cellulose synthase A catalytic subunit 6 [UDP-forming] (sp|Q6YVM4|CESA6_ORYSJ) cellulose synthase A2 (AT4G39350.1); X-box TRANSCRIPTION factor-related scaffold00051:891008..896456 2
Ciunshiu_m25095.g gene: CCR4-NOT transcription complex subunit 3 (sp|O75175|CNOT3_HUMAN) transcription regulator NOT2/NOT3/NOT5 family protein (AT5G18230.4); CCR4-NOT complex, subunit 3/ 5 scaffold00010:204335..215970 2
Ciunshiu_m25128.g gene: Eukaryotic translation initiation factor NCBP (sp|Q9FK59|IF4E5_ARATH) Putative cap-binding protein (AT5G18110.1); Translation Initiation factor eIF- 4e scaffold00010:387605..390671 2
Ciunshiu_m25130.g gene: Auxin response factor 3 (sp|Q5JMM1|ARFC_ORYSJ); DNA-binding pseudobarrel domain scaffold00010:482831..483229 2
Ciunshiu_m25192.g gene: Transcription factor MYB44 (sp|Q9FDW1|MYB44_ARATH) myb domain protein 105 (AT1G69560.1); MYB-LIKE DNA-binding protein MYB scaffold00010:921717..923352 2
Ciunshiu_m28877.g gene: Ethylene-responsive transcription factor-like protein At4g13040 (sp|Q56XP9|ERFL1_ARATH) Integrase-type DNA-binding superfamily protein (AT4G13040.3) scaffold00010:1084847..1091106 2
Ciunshiu_m25258.g gene: Thioredoxin-like protein 4B (sp|Q9NX01|TXN4B_HUMAN) mRNA splicing factor, thioredoxin-like U5 snRNP (AT3G24730.1); mRNA splicing factor, thioredoxin-like U5 snRNP scaffold00010:1432008..1435249 2
Ciunshiu_m25335.g gene: Cellulose synthase A catalytic subunit 4 [UDP-forming] (sp|Q84JA6|CESA4_ARATH) cellulose synthase A4 (AT5G44030.3); X-box TRANSCRIPTION factor-related scaffold00010:1994993..1999699 2
Ciunshiu_m25393.g gene: Rho-N domain-containing protein 1, chloroplastic (sp|Q94K75|RHON1_ARATH) Rho termination factor (AT1G06190.1); Rho termination factor, N-terminal scaffold00010:2354119..2357412 2
Ciunshiu_m05269.g gene: Transcription factor bHLH52 (sp|Q9SA82|BH052_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT2G34820.1) scaffold00002:702140..703162 2
Ciunshiu_m05334.g gene: 30-kDa cleavage and polyadenylation specificity factor 30 (sp|A9LNK9|CPSF_ARATH) cleavage and polyadenylation specificity factor 30 (AT1G30460.1); YTH (YT521-B HOMOLOGY) domain-containing scaffold00002:1197140..1205132 2
Ciunshiu_m05463.g gene: Transcription factor ILR3 (sp|Q9FH37|ILR3_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G54680.1); CIRCADIAN protein CLOCK/ARNT/BMAL/PAS scaffold00002:2120570..2123649 2
Ciunshiu_m05472.g gene: Transcription factor DYT1 (sp|O81900|DYT1_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G21330.1) scaffold00002:2200749..2201793 2
Ciunshiu_m05471.g gene: Transcription factor bHLH112 (sp|Q94JL3|BH112_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G61660.6) scaffold00002:2219371..2222099 2
Ciunshiu_m05531.g gene: Pre-mRNA-splicing factor SYF1 (sp|Q99PK0|SYF1_RAT) Tetratricopeptide repeat (TPR)-like superfamily protein (AT5G28740.1); PRE-MRNA SPLICING factor scaffold00002:2587309..2593789 2
Ciunshiu_m05604.g gene: Eukaryotic translation initiation factor 3 subunit D (sp|P56820|EIF3D_ARATH) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (AT4G20980.2); Eukaryotic translation initiation factor 3 subunit D scaffold00002:3165527..3167248 2
Ciunshiu_m05627.g gene: Protein RALF-like 19 (sp|Q6NME6|RLF19_ARATH); Rapid ALkalinization Factor scaffold00002:3202173..3202611 2
Ciunshiu_m05668.g gene: Pathogenesis-related genes transcriptional activator PTI5 (sp|O04681|PTI5_SOLLC) ethylene responsive element binding factor 2 (AT5G47220.1) scaffold00002:3547573..3547935 2
Ciunshiu_m05662.g gene: ATP synthase mitochondrial F1 complex assembly factor 1 (sp|Q5TC12|ATPF1_HUMAN) ATP synthase F1 complex assembly factor (AT2G34050.1); ATP11 scaffold00002:3583289..3585599 2
Ciunshiu_m05704.g gene: Transcription factor bHLH30 (sp|Q9S7Y1|BH030_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G68810.1); STEROL regulatory element-binding protein scaffold00002:3776608..3779810 2
Ciunshiu_m05744.g gene: Cellulose synthase A catalytic subunit 8 [UDP-forming] (sp|Q8LPK5|CESA8_ARATH) cellulose synthase family protein (AT4G18780.1); X-box TRANSCRIPTION factor-related scaffold00002:4004924..4010541 2
Ciunshiu_m05771.g gene: Floral homeotic protein AGAMOUS (sp|Q40885|AG_PETHY) K-box region and MADS-box transcription factor family protein (AT4G18960.1); MADS box protein scaffold00002:4258565..4265286 2
Ciunshiu_m27473.g gene: Floral homeotic protein AGAMOUS (sp|Q40885|AG_PETHY) K-box region and MADS-box transcription factor family protein (AT4G18960.1); MADS box protein scaffold00002:4258565..4265455 2
Ciunshiu_m17624.g gene: LIM domain-containing protein WLIM1 (sp|Q94JX5|WLIM1_ARATH) GATA type zinc finger transcription factor family protein (AT1G10200.1) scaffold00042:229287..230819 2
Ciunshiu_m17635.g gene: Transcription factor bHLH74 (sp|Q6NKN9|BH074_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G10120.1); STEROL regulatory element-binding protein scaffold00042:371079..375089 2
Ciunshiu_m17657.g gene: Homeobox protein knotted-1-like 2 (sp|O04135|KNAP2_MALDO) homeobox knotted-like protein (AT4G08150.1); HOMEObox protein TRANSCRIPTION factorS scaffold00042:462676..468474 2
Ciunshiu_m17661.g gene: EPIDERMAL PATTERNING FACTOR-like protein 2 (sp|Q9T068|EPFL2_ARATH) scaffold00042:493221..493774 2
Ciunshiu_m01707.g gene: Heme-binding protein 2 (sp|Q9WU63|HEBP2_MOUSE); Regulatory factor, effector binding domain scaffold00004:421691..422442 2
Ciunshiu_m01713.g gene: Homeobox protein knotted-1-like 6 (sp|Q84JS6|KNAT6_ARATH) homeobox protein knotted-1-like 6 (AT1G23380.1); HOMEObox protein TRANSCRIPTION factorS scaffold00004:476364..483830 2
Ciunshiu_m27207.g gene: Transcription factor bHLH90 (sp|Q0WNR2|BH090_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G10610.1) scaffold00004:662535..665208 2
Ciunshiu_m01735.g gene: Transcription factor bHLH90 (sp|Q0WNR2|BH090_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G10610.2) scaffold00004:662571..665208 2
Ciunshiu_m01765.g gene: Transcription factor WER (sp|Q9SEI0|WER_ARATH) myb domain protein 66 (AT5G14750.1); MYB-LIKE DNA-binding protein MYB scaffold00004:704833..706458 2
Ciunshiu_m01776.g gene: Serine/arginine-rich splicing factor RSZ21 (sp|O81127|RSZ21_ARATH) RS-containing zinc finger protein 21 (AT1G23860.2); SPLICING factor, ARGININE/SERINE-rich scaffold00004:851665..854998 2
Ciunshiu_m01870.g gene: LIM domain-containing protein WLIM2b (sp|Q9M047|WLI2B_ARATH) GATA type zinc finger transcription factor family protein (AT3G55770.4) scaffold00004:1494483..1494881 2
Ciunshiu_m27213.g gene: LIM domain-containing protein WLIM2b (sp|Q9M047|WLI2B_ARATH) GATA type zinc finger transcription factor family protein (AT3G55770.1) scaffold00004:1494483..1495088 2
Ciunshiu_m01885.g gene: AP2-like ethylene-responsive transcription factor At1g16060 (sp|Q94AN4|AP2L1_ARATH) Integrase-type DNA-binding superfamily protein (AT1G79700.2) scaffold00004:1595304..1597313 2
Ciunshiu_m01905.g gene: Transcription factor PRE6 (sp|Q8GW32|PRE6_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G26945.1); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00004:1729505..1730152 2
Ciunshiu_m01946.g gene: Transcription factor MYB44 (sp|Q9FDW1|MYB44_ARATH) myb domain protein 105 (AT1G69560.1); MYB-LIKE DNA-binding protein MYB scaffold00004:1990835..1992651 2
Ciunshiu_m01972.g gene: Transcription factor MYB39 (sp|Q8GWP0|MYB39_ARATH) myb domain protein 106 (AT3G01140.2); MYB-LIKE DNA-binding protein MYB scaffold00004:2097917..2099461 2
Ciunshiu_m01971.g gene: ARF guanine-nucleotide exchange factor GNOM (sp|Q42510|GNOM_ARATH) sec7 domain-containing protein (AT1G13980.1); GUANYL-NUCLEOTIDE EXCHANGE factor scaffold00004:2163439..2168415 2
Ciunshiu_m01968.g gene: ARF guanine-nucleotide exchange factor GNOM (sp|Q42510|GNOM_ARATH) sec7 domain-containing protein (AT1G13980.1); GUANYL-NUCLEOTIDE EXCHANGE factor scaffold00004:2174550..2174888 2
Ciunshiu_m01989.g gene: Cell division topological specificity factor homolog, chloroplastic (sp|Q9C4Z7|MINE1_ARATH) homologue of bacterial MinE 1 (AT1G69390.1); Septum formation topological specificity factor MinE scaffold00004:2260616..2262948 2
Ciunshiu_m02042.g gene: Transcription factor bHLH137 (sp|Q93W88|BH137_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G50915.4); STEROL regulatory element-binding protein scaffold00004:2564701..2567911 2
Ciunshiu_m02061.g gene: Mediator of RNA polymerase II transcription subunit 28 (sp|Q9LFA5|MED28_ARATH) mediator of RNA polymerase II transcription subunit-like protein (AT3G52860.1) scaffold00004:2641980..2643195 2
Ciunshiu_m02099.g gene: RNA polymerase sigma factor sigD, chloroplastic (sp|Q9ZSL6|SIGD_ARATH) sigma factor 4 (AT5G13730.1); NAD DEPENDENT EPIMERASE/DEHYDRATASE scaffold00004:2932154..2934083 2
Ciunshiu_m02123.g gene: Transcription factor bHLH130 (sp|Q66GR3|BH130_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT2G42280.1) scaffold00004:3004812..3008005 2
Ciunshiu_m02135.g gene: Transcription factor MYB46 (sp|Q9LXV2|MYB46_ARATH) myb domain protein 83 (AT3G08500.1); MYB-LIKE DNA-binding protein MYB scaffold00004:3124828..3126868 2
Ciunshiu_m02144.g gene: Cellulose synthase A catalytic subunit 3 [UDP-forming] (sp|Q941L0|CESA3_ARATH) Cellulose synthase family protein (AT5G05170.1); X-box TRANSCRIPTION factor-related scaffold00004:3160224..3167004 2
Ciunshiu_m04885.g gene: Transcription factor bHLH68 (sp|Q8S3D1|BH068_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G29100.1) scaffold00054:400493..404129 2
Ciunshiu_m04898.g gene: Elongation factor Ts (sp|Q11IJ7|EFTS_CHESB) elongation factor Ts family protein (AT4G29060.1); S1 RNA-binding domain-containing protein 1 scaffold00054:511320..516348 2
Ciunshiu_m04890.g gene: Mediator of RNA polymerase II transcription subunit (AT4G28840.1) scaffold00054:528446..530241 2
Ciunshiu_m27651.g gene: Photosystem II stability/assembly factor HCF136, chloroplastic (sp|O82660|P2SAF_ARATH) photosystem II stability/assembly factor, chloroplast (HCF136) (AT5G23120.1) scaffold00036:126451..131919 2
Ciunshiu_m08336.g gene: Thioredoxin-like protein YLS8 (sp|Q9FE62|YLS8_ARATH) mRNA splicing factor, thioredoxin-like U5 snRNP (AT5G08290.1); mRNA splicing factor, thioredoxin-like U5 snRNP scaffold00036:248766..252215 2
Ciunshiu_m08352.g gene: Lysine-specific demethylase JMJ25 (sp|Q9SSE9|JMJ25_ARATH) Transcription factor jumonji (jmjC) domain-containing protein (AT3G07610.1); JMJC domain-containing HISTONE DEMETHYLATION protein scaffold00036:286304..296079 2
Ciunshiu_m08351.g gene: Protein TRANSPARENT TESTA 16 (sp|Q8RYD9|TT16_ARATH) K-box region and MADS-box transcription factor family protein (AT5G23260.4); MADS box protein scaffold00036:299325..301730 2
Ciunshiu_m08372.g gene: Elongation factor Tu GTP-binding domain-containing protein 1 (sp|Q8C0D5|ETUD1_MOUSE) Ribosomal protein S5/Elongation factor G/III/V family protein (AT3G22980.3); TRANSLATION factor scaffold00036:440286..443360 2
Ciunshiu_m08444.g gene: Transcription factor bHLH30 (sp|Q9S7Y1|BH030_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G68810.1); STEROL regulatory element-binding protein scaffold00036:1047418..1049998 2
Ciunshiu_m24623.g gene: Uncharacterized HTH La-type RNA-binding protein C1527.03 (sp|Q9P6K0|YLA3_SCHPO) winged-helix DNA-binding transcription factor family protein (AT4G35890.2) scaffold00018:166980..171367 2
Ciunshiu_m24726.g gene: Floral homeotic protein DEFICIENS (sp|P23706|DEFA_ANTMA) K-box region and MADS-box transcription factor family protein (AT3G54340.1); MADS box protein scaffold00018:870561..872405 2
Ciunshiu_m24755.g gene: BEL1-like homeodomain protein 11 (sp|Q1PFD1|BLH11_ARATH) BEL1-like homeodomain 11 (AT1G75430.1); HOMEObox protein TRANSCRIPTION factorS scaffold00018:1013553..1016617 2
Ciunshiu_m24763.g gene: Transcription factor bHLH110 (sp|Q9SFZ3|BH110_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G27660.1) scaffold00018:1115285..1117506 2
Ciunshiu_m12528.g gene: Pathogenesis-related homeodomain protein (sp|P48785|PRH_ARATH) pathogenesis related homeodomain protein A (AT4G29940.2); POLYCOMB-LIKE TRANSCRIPTION factor scaffold00005:653372..659253 2
Ciunshiu_m12546.g gene: Macrophage migration inhibitory factor homolog (sp|P81748|MIFH_TRITR) Tautomerase/MIF superfamily protein (AT5G57170.2); Macrophage migration inhibitory factor scaffold00005:693652..695794 2
Ciunshiu_m12552.g gene: Transcription factor bHLH35 (sp|Q2HIV9|BH035_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G29930.2); MYC scaffold00005:714753..719285 2
Ciunshiu_m12660.g gene: Eukaryotic initiation factor 4A-9 (sp|Q40471|IF4A9_TOBAC) eif4a-2 (AT1G54270.1) scaffold00005:1674147..1676745 2
Ciunshiu_m12708.g gene: Transcription factor MYB3 (sp|Q9S9K9|MYB3_ARATH) Duplicated homeodomain-like superfamily protein (AT5G35550.1); MYB-LIKE DNA-binding protein MYB scaffold00005:1958630..1959958 2
Ciunshiu_m12709.g gene: Floral homeotic protein PMADS 1 (sp|Q07472|MADS1_PETHY) K-box region and MADS-box transcription factor family protein (AT3G54340.1); MADS box protein scaffold00005:1982164..1984489 2
Ciunshiu_m12755.g gene: Initiation factor 4F subunit (DUF1350) (AT3G43540.1); Alpha/Beta hydrolase fold scaffold00005:2230742..2238936 2
Ciunshiu_m12888.g gene: Transcription factor MYB35 (sp|Q9LSI7|MYB35_ARATH) myb domain protein 103 (AT5G56110.1); MYB-LIKE DNA-binding protein MYB scaffold00005:3132616..3133995 2
Ciunshiu_m04179.g gene: Pre-mRNA-splicing factor syf2 (sp|Q8AVQ6|SYF2_XENLA) GCIP-interacting family protein (AT2G16860.2); mRNA splicing factor SYF2 scaffold00031:384066..387254 2
Ciunshiu_m04184.g gene: Transcription factor ABORTED MICROSPORES (sp|Q9ZVX2|AMS_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT2G16910.1) scaffold00031:408755..411196 2
Ciunshiu_m04199.g gene: RNA-binding protein 39 (sp|Q5RC80|RBM39_PONAB) Splicing factor, CC1-like protein (AT2G16940.1); Splicing factor, RBM39-like scaffold00031:537145..545317 2
Ciunshiu_m04228.g gene: Rop guanine nucleotide exchange factor 1 (sp|Q93ZY2|ROGF1_ARATH) rho guanyl-nucleotide exchange factor 1 (AT4G38430.1); PRONE domain scaffold00031:747532..750917 2
Ciunshiu_m04289.g gene: Cellulose synthase-like protein D4 (sp|Q9SZL9|CSLD4_ARATH) cellulose synthase like D4 (AT4G38190.1); X-box TRANSCRIPTION factor-related scaffold00031:1207454..1211153 2
Ciunshiu_m13988.g gene: Protein PELOTA 1 (sp|Q9ZT87|PEL1_ARATH) Eukaryotic release factor 1 (eRF1) family protein (AT4G27650.1); Translation release factor pelota scaffold00024:375289..384449 2
Ciunshiu_m14003.g gene: Mediator of RNA polymerase II transcription subunit 14 (sp|Q9SR02|MED14_ARATH) RNA polymerase II transcription mediator (AT3G04740.1); MEDIATOR COMPLEX SUBUNIT scaffold00024:757618..768565 2
Ciunshiu_m14011.g gene: Transcription factor UNE12 (sp|O22768|UNE12_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G02590.1) scaffold00024:772127..774242 2
Ciunshiu_m14018.g gene: Light-inducible protein CPRF2 (sp|Q99090|CPRF2_PETCR) bZIP transcription factor family protein (AT5G28770.2); CAMP-RESPONSE element binding protein-related scaffold00024:804003..808197 2
Ciunshiu_m14051.g gene: Neurogenic locus notch-like protein (AT4G14746.1); Epidermal growth factor-like domain scaffold00024:1124130..1126099 2
Ciunshiu_m17143.g gene: Transcription factor bHLH113 (sp|Q9LT67|BH113_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT3G19500.1) scaffold00047:125143..127047 2
Ciunshiu_m17192.g gene: LIM domain-containing protein WLIM1 (sp|Q94JX5|WLIM1_ARATH) GATA type zinc finger transcription factor family protein (AT1G10200.1) scaffold00047:568901..571347 2
Ciunshiu_m17202.g gene: Telomere repeat-binding factor 1 (sp|Q8VWK4|TRB1_ARATH) telomere repeat binding factor 1 (AT1G49950.3); TELOMERIC repeat binding protein scaffold00047:580287..583463 2
Ciunshiu_m09091.g gene: Transcription factor RAX3 (sp|Q9M2Y9|RAX3_ARATH) myb domain protein 36 (AT5G57620.1); MYB-LIKE DNA-binding protein MYB scaffold00045:108280..109642 2
Ciunshiu_m09171.g gene: AP2-like ethylene-responsive transcription factor At1g16060 (sp|Q94AN4|AP2L1_ARATH) ARIA-interacting double AP2 domain protein (AT1G16060.3) scaffold00045:723595..726069 2
Ciunshiu_m09191.g gene: Cellulose synthase A catalytic subunit 7 [UDP-forming] (sp|Q9SWW6|CESA7_ARATH) Cellulose synthase family protein (AT5G17420.1); X-box TRANSCRIPTION factor-related scaffold00045:864989..870652 2
Ciunshiu_m09190.g gene: Cellulose synthase A catalytic subunit 7 [UDP-forming] (sp|Q9SWW6|CESA7_ARATH) Cellulose synthase family protein (AT5G17420.1); X-box TRANSCRIPTION factor-related scaffold00045:873712..878395 2
Ciunshiu_m20504.g gene: Trihelix transcription factor GT-1 (sp|Q9FX53|TGT1_ARATH) Homeodomain-like superfamily protein (AT1G13450.1); C2H2- zinc finger protein family scaffold00022:317492..323148 2
Ciunshiu_m20563.g gene: REF/SRPP-like protein At1g67360 (sp|Q9FYF7|Y1736_ARATH) Rubber elongation factor protein (REF) (AT1G67360.2); Rubber elongation factor scaffold00022:714163..715717 2
Ciunshiu_m20587.g gene: Calmodulin-binding transcription activator 4 (sp|Q9FYG2|CMTA4_ARATH) Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain (AT1G67310.1); CALMODULIN-binding TRANSCRIPTION ACTIVATOR (CAMTA) scaffold00022:898326..907525 2
Ciunshiu_m20591.g gene: Developmental protein SEPALLATA 3 (sp|O22456|SEP3_ARATH) K-box region and MADS-box transcription factor family protein (AT1G24260.3); MADS box protein scaffold00022:939918..940506 2
Ciunshiu_m20589.g gene: Agamous-like MADS-box protein AGL9 homolog (sp|Q03489|AGL9_PETHY) K-box region and MADS-box transcription factor family protein (AT1G24260.1); MADS box protein scaffold00022:946738..952980 2
Ciunshiu_m20585.g gene: Teosinte glume architecture 1 (sp|Q49I55|TGA1W_MAIZE) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (AT5G50670.1) scaffold00022:965773..969044 2
Ciunshiu_m20600.g gene: Transcription factor TCP20 (sp|Q9LSD5|TCP20_ARATH) TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (AT3G27010.2) scaffold00022:1066950..1067774 2
Ciunshiu_m20671.g gene: Squamosa promoter-binding-like protein 6 (sp|Q94JW8|SPL6_ARATH) Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (AT1G69170.1) scaffold00022:1401443..1407343 2
Ciunshiu_m20664.g gene: Developmental protein SEPALLATA 1 (sp|P29382|SEP1_ARATH) K-box region and MADS-box transcription factor family protein (AT5G15800.1); MADS box protein scaffold00022:1442347..1452077 2
Ciunshiu_m20660.g gene: Floral homeotic protein APETALA 1 (sp|Q41276|AP1_SINAL) K-box region and MADS-box transcription factor family protein (AT1G69120.1); MADS box protein scaffold00022:1464749..1470347 2
Ciunshiu_m11661.g gene: Transcription factor MYB86 (sp|Q8LPH6|MYB86_ARATH) myb domain protein 67 (AT3G12720.1); MYB-LIKE DNA-binding protein MYB scaffold00016:1687150..1688417 2
Ciunshiu_m27421.g gene: Eukaryotic translation initiation factor 3 subunit J (sp|Q6INR1|EIF3J_XENLA) Translation initiation factor eIF3 subunit (AT1G66070.2) scaffold00043:469638..475153 2
Ciunshiu_m23579.g gene: Serine/arginine-rich-splicing factor SR34 (sp|O22315|SR34_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT1G02840.5); SPLICING factor, ARGININE/SERINE-rich scaffold00012:1584717..1590683 2
Ciunshiu_m23581.g gene: Mediator of RNA polymerase II transcription subunit 28 (sp|Q9LFA5|MED28_ARATH) mediator of RNA polymerase II transcription subunit-like protein (AT3G52860.1) scaffold00012:1713848..1717018 2
Ciunshiu_m23593.g gene: Ethylene-responsive transcription factor RAP2-3 (sp|P42736|RAP23_ARATH) Integrase-type DNA-binding superfamily protein (AT2G47520.1) scaffold00012:1870256..1871971 2
Ciunshiu_m23608.g gene: Cellulose synthase-like protein D5 (sp|Q9SRW9|CSLD5_ARATH) cellulose synthase-like D5 (AT1G02730.1); X-box TRANSCRIPTION factor-related scaffold00012:1963767..1967836 2
Ciunshiu_m23640.g gene: Transcription factor MYB12 (sp|O22264|MYB12_ARATH) myb domain protein 111 (AT5G49330.1); MYB-LIKE DNA-binding protein MYB scaffold00012:2093278..2094909 2
Ciunshiu_m23643.g gene: Transcription factor MYB12 (sp|O22264|MYB12_ARATH) myb domain protein 12 (AT2G47460.1); MYB-LIKE DNA-binding protein MYB scaffold00012:2112689..2114793 2
Ciunshiu_m23656.g gene: DNA replication licensing factor MCM7 (sp|P43299|MCM7_ARATH) Minichromosome maintenance (MCM2/3/5) family protein (AT4G02060.1); DNA replication licensing factor scaffold00012:2254778..2262507 2
Ciunshiu_m23653.g gene: BZIP transcription factor 53 (sp|Q9LZP8|BZP53_ARATH) basic region/leucine zipper motif 53 (AT3G62420.1); CAMP-RESPONSE element binding protein-related scaffold00012:2291577..2292014 2
Ciunshiu_m06627.g gene: Translation initiation factor eIF-2B subunit delta (sp|P41111|EI2BD_RABIT) NagB/RpiA/CoA transferase-like superfamily protein (AT5G38640.1); TRANSLATION INITIATION factor EIF-2B scaffold00032:158149..161621 2
Ciunshiu_m06642.g gene: Dihydroflavonol 4-reductase/flavanone protein (AT3G02420.1); RNA POLYMERASE SIGMA factor RPO scaffold00032:209532..213628 2
Ciunshiu_m06681.g gene: Transcription factor MYB48 (sp|Q9LX82|MYB48_ARATH) myb domain protein 121 (AT3G30210.1); MYB-LIKE DNA-binding protein MYB scaffold00032:583555..584712 2
Ciunshiu_m06699.g gene: Developmental protein SEPALLATA 1 (sp|P29382|SEP1_ARATH) K-box region and MADS-box transcription factor family protein (AT5G15800.1); MADS box protein scaffold00032:593478..598457 2
Ciunshiu_m06698.g gene: Agamous-like MADS-box protein AGL8 homolog (sp|Q42429|AGL8_SOLTU) K-box region and MADS-box transcription factor family protein (AT1G69120.2); MADS box protein scaffold00032:611318..616766 2
Ciunshiu_m06716.g gene: Transcription factor BIM2 (sp|Q9CAA4|BIM2_ARATH) BES1-interacting Myc-like protein 2 (AT1G69010.1); STEROL regulatory element-binding protein scaffold00032:691017..694802 2
Ciunshiu_m06755.g gene: Transcription factor MYB35 (sp|Q9LSI7|MYB35_ARATH) Duplicated homeodomain-like superfamily protein (AT3G28470.1); MYB-LIKE DNA-binding protein MYB scaffold00032:1055711..1056999 2
Ciunshiu_m08676.g gene: Eukaryotic translation initiation factor 2A (sp|O74965|EIF2A_SCHPO) Eukaryotic translation initiation factor eIF2A family protein (AT1G73180.1); NUCLEASE-related scaffold00025:314338..321131 2
Ciunshiu_m08670.g gene: Transcription factor bHLH113 (sp|Q9LT67|BH113_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G05710.1) scaffold00025:343086..347747 2
Ciunshiu_m08728.g gene: Probable WRKY transcription factor 19 (sp|Q9SZ67|WRK19_ARATH) Disease resistance protein (TIR-NBS-LRR class) family (AT4G12010.1); LEUCINE-rich repeat-containing protein scaffold00025:967463..972073 2
Ciunshiu_m08735.g gene: Probable WRKY transcription factor 19 (sp|Q9SZ67|WRK19_ARATH) Disease resistance protein (TIR-NBS-LRR class) family (AT4G12010.1); L domain-like scaffold00025:1146969..1148700 2
Ciunshiu_m24492.g gene: Transcription factor MYB59 (sp|Q4JL84|MYB59_ARATH) myb domain protein 305 (AT3G24310.1); MYB-LIKE DNA-binding protein MYB scaffold00034:471287..472309 2
Ciunshiu_m24550.g gene: Pre-mRNA-processing factor 19 homolog 2 (sp|O22785|PR19B_ARATH) MOS4-associated complex 3B (AT2G33340.1); PRE-MRNA SPLICING factor PRP19-related scaffold00034:1022353..1030237 2
Ciunshiu_m21341.g gene: Transcription factor GTE12 (sp|Q9LS28|GTE12_ARATH) DNA-binding bromodomain-containing protein (AT5G46550.1); FALZ-related BROMOdomain-containing proteinS scaffold00003:7985..12217 2
Ciunshiu_m21371.g gene: Transcription factor bHLH144 (sp|Q9ASX9|BH144_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G29950.1); STEROL regulatory element-binding protein scaffold00003:242233..242958 2
Ciunshiu_m21386.g gene: DNA replication licensing factor MCM3 (sp|Q9FL33|MCM3_ARATH) Minichromosome maintenance (MCM2/3/5) family protein (AT5G46280.4); DNA replication licensing factor scaffold00003:308322..313387 2
Ciunshiu_m28617.g gene: Putative Myb family transcription factor At1g14600 (sp|Q700D9|MYBF_ARATH) Myb-like DNA-binding domain protein (AT4G04605.1) scaffold00003:749384..752565 2
Ciunshiu_m21466.g gene: Lysine-specific demethylase JMJ25 (sp|Q9SSE9|JMJ25_ARATH) Transcription factor jumonji (jmjC) domain-containing protein (AT1G11950.3); JMJC domain-containing HISTONE DEMETHYLATION protein scaffold00003:861687..868090 2
Ciunshiu_m21507.g gene: Upstream activation factor subunit spp27 (sp|O74503|UAF30_SCHPO) SWIB complex BAF60b domain-containing protein (AT4G22360.1); BRG-1 ASSOCIATED factor 60 (BAF60) scaffold00003:1139147..1142441 2
Ciunshiu_m21579.g gene: Pre-mRNA-splicing factor CWC25 homolog (sp|Q9DBF7|CWC25_MOUSE) pre-mRNA splicing factor domain-containing protein (AT2G44200.1); CELL CYCLE CONTROL protein CWF25 scaffold00003:1460751..1464985 2
Ciunshiu_m21654.g gene: Calmodulin-binding transcription activator 3 (sp|Q8GSA7|CMTA3_ARATH) signal responsive 1 (AT2G22300.2); CALMODULIN-binding TRANSCRIPTION ACTIVATOR (CAMTA) scaffold00003:1984823..1992792 2
Ciunshiu_m21679.g gene: Transcription factor MYB108 (sp|Q9LDE1|MY108_ARATH) myb domain protein 78 (AT5G49620.1); MYB-LIKE DNA-binding protein MYB scaffold00003:2204237..2206419 2
Ciunshiu_m21760.g gene: Transcription factor MYB12 (sp|O22264|MYB12_ARATH) myb domain protein 111 (AT5G49330.1); MYB-LIKE DNA-binding protein MYB scaffold00003:2782253..2784874 2
Ciunshiu_m21939.g gene: Serine/arginine-rich SC35-like splicing factor SCL28 (sp|Q1PDV2|SRC28_ARATH) SC35-like splicing factor 28 (AT5G18810.2) scaffold00003:3982346..3986635 2
Ciunshiu_m22368.g gene: G-box-binding factor 1 (sp|P42774|GBF1_ARATH) G-box binding factor 1 (AT4G36730.1); CAMP-RESPONSE element binding protein-related scaffold00017:1242665..1248493 2
Ciunshiu_m22393.g gene: BEL1-like homeodomain protein 4 (sp|Q94KL5|BLH4_ARATH) BEL1-like homeodomain 4 (AT2G23760.3); HOMEObox protein TRANSCRIPTION factorS scaffold00017:1479326..1487200 2
Ciunshiu_m22418.g gene: Putative B3 domain-containing protein At5g66980 (sp|Q9FGD2|Y5698_ARATH) AP2/B3-like transcriptional factor family protein (AT5G66980.1) scaffold00017:1631613..1634367 2
Ciunshiu_m15548.g gene: LIM domain-containing protein WLIM1 (sp|Q94JX5|WLIM1_ARATH) GATA type zinc finger transcription factor family protein (AT1G10200.1) scaffold00008:267930..271181 2
Ciunshiu_m15580.g gene: CCR4-NOT transcription complex subunit 4 (sp|Q8BT14|CNOT4_MOUSE) RING/U-box superfamily protein (AT5G62910.2); CCR4-NOT TRANSCRIPTION COMPLEX related scaffold00008:399232..403487 2
Ciunshiu_m15590.g gene: Transcription factor bHLH79 (sp|Q9LV17|BH079_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G62610.2); STEROL regulatory element-binding protein scaffold00008:532871..536108 2
Ciunshiu_m15588.g gene: Transcription factor MYB35 (sp|Q9LSI7|MYB35_ARATH) Duplicated homeodomain-like superfamily protein (AT3G28470.1); MYB-LIKE DNA-binding protein MYB scaffold00008:551309..552888 2
Ciunshiu_m15633.g gene: Transcription factor PRE3 (sp|Q9CA64|PRE3_ARATH) activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 (AT1G74500.1); Myc-type, basic helix-loop-helix (bHLH) domain scaffold00008:886765..887795 2
Ciunshiu_m15649.g gene: Transcription factor bHLH47 (sp|Q9SN74|BH047_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT3G47640.3); CIRCADIAN protein CLOCK/ARNT/BMAL/PAS scaffold00008:947501..950004 2
Ciunshiu_m15658.g gene: Lysine-specific demethylase 5C (sp|P41230|KDM5C_MOUSE) transcription factor jumonji (jmjC) domain-containing protein (AT1G63490.4); JUMONJI domain containing protein scaffold00008:1024637..1040291 2
Ciunshiu_m15697.g gene: Protein polybromo-1 (sp|Q8BSQ9|PB1_MOUSE) bromo-adjacent homology (BAH) domain-containing protein (AT4G11560.1); TRANSCRIPTION ELONGATION factor B POLYPEPTIDE 3 scaffold00008:1191594..1198899 2
Ciunshiu_m15694.g gene: Transcription factor GLABRA 3 (sp|Q9FN69|GL3_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G41315.1); MYC scaffold00008:1254798..1257711 2
Ciunshiu_m15718.g gene: Homeobox protein BEL1 homolog (sp|Q38897|BEL1_ARATH) POX (plant homeobox) family protein (AT5G41410.1); HOMEObox protein TRANSCRIPTION factorS scaffold00008:1465913..1470114 2
Ciunshiu_m15728.g gene: Nuclear transport factor 2 (NTF2) family protein (AT5G41470.1); NTF2-like scaffold00008:1491935..1493332 2
Ciunshiu_m15736.g gene: Transcription factor MYB26 (sp|Q9SPG3|MYB26_ARATH) myb domain protein 103 (AT1G63910.1); MYB-LIKE DNA-binding protein MYB scaffold00008:1539069..1540904 2
Ciunshiu_m15780.g gene: Translation initiation factor IF-1, chloroplastic (sp|A6MM71|IF1C_BUXMI) Nucleic acid-binding, OB-fold-like protein (AT4G11175.1); Translation initiation factor IF-1 scaffold00008:1783058..1784077 2
Ciunshiu_m15844.g gene: Cellulose synthase-like protein G3 (sp|Q0WVN5|CSLG3_ARATH) cellulose synthase like G3 (AT4G23990.1); X-box TRANSCRIPTION factor-related scaffold00008:2288263..2296450 2
Ciunshiu_m26522.g gene: Transcription factor MYB86 (sp|Q8LPH6|MYB86_ARATH) myb domain protein 67 (AT3G12720.1); MYB-LIKE DNA-binding protein MYB scaffold00050:35766..36880 2
Ciunshiu_m26562.g gene: Protein FAR-RED ELONGATED HYPOCOTYL 3 (sp|Q9LIE5|FHY3_ARATH) FRS (FAR1 Related Sequences) transcription factor family (AT4G15090.1) scaffold00050:295747..299817 2
Ciunshiu_m26569.g gene: MADS-box protein defh21 (sp|Q8RVL4|DEF21_ANTMA) K-box region and MADS-box transcription factor family protein (AT5G23260.2); MADS box protein scaffold00050:394682..397180 2
Ciunshiu_m26586.g gene: Protein NAP1 (sp|Q5S2C4|NCKP1_ARATH) transcription activator (AT2G35110.2) scaffold00050:563742..578428 2
Ciunshiu_m26624.g gene: Transcription factor bHLH96 (sp|Q9C7T4|BH096_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G72210.1); MAX DIMERIZATION, MAD scaffold00050:919110..920472 2
Ciunshiu_m03608.g gene: Probable CCR4-associated factor 1 homolog 7 (sp|Q9SKZ2|CAF1G_ARATH) Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AT1G80780.3); CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT scaffold00023:432446..435679 2
Ciunshiu_m03609.g gene: Stromal cell-derived factor 2-like protein (sp|Q93ZE8|SDF2_ARATH) stromal cell-derived factor 2-like protein precursor (AT2G25110.1); Glycosyltransferase 39 like scaffold00023:456012..458542 2
Ciunshiu_m03611.g gene: Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION (sp|Q6NQ99|POLAR_ARATH) WRKY family transcription factor (AT4G31805.1) scaffold00023:574124..576776 2
Ciunshiu_m03724.g gene: Flowering-promoting factor 1-like protein 2 (sp|Q9LXB5|FLP2_ARATH) flowering-promoting factor-like protein (AT4G31380.1) scaffold00023:1236960..1237292 2
Ciunshiu_m03755.g gene: DDB1- and CUL4-associated factor homolog 1 (sp|Q9M086|DCAF1_ARATH) DDB1-CUL4 associated factor 1 (AT4G31160.1); VPRBP protein-related scaffold00023:1463830..1473001 2
Ciunshiu_m27265.g gene: General transcription factor IIH subunit 5 (sp|Q5ZKH0|TF2H5_CHICK) Nucleotide excision repair, TFIIH, subunit TTDA (AT1G12400.1) scaffold00020:380277..382028 2
Ciunshiu_m02554.g gene: General transcription factor IIH subunit 5 (sp|Q5ZKH0|TF2H5_CHICK) Nucleotide excision repair, TFIIH, subunit TTDA (AT1G12400.1); TFIIH subunit TTDA/Tfb5 scaffold00020:380277..382038 2
Ciunshiu_m02558.g gene: Peptidyl-tRNA hydrolase ICT1, mitochondrial (sp|B5XAM2|ICT1_SALSA) Class I peptide chain release factor (AT1G62850.3); PEPTIDE CHAIN RELEASE factor scaffold00020:477164..480429 2
Ciunshiu_m02662.g gene: Transcription factor MYB82 (sp|Q9LTF7|MYB82_ARATH) myb domain protein 82 (AT5G52600.1); MYB-LIKE DNA-binding protein MYB scaffold00020:1297458..1298528 2
Ciunshiu_m22544.g gene: Mediator of RNA polymerase II transcription subunit 15a (sp|F4I171|MD15A_ARATH) mediator of RNA polymerase II transcription subunit 15a-like protein (AT1G15780.3) scaffold00021:45987..52676 2
Ciunshiu_m22576.g gene: Transcription factor bHLH106 (sp|O80674|BH106_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT2G41130.1); STEROL regulatory element-binding protein scaffold00021:335587..336949 2
Ciunshiu_m22617.g gene: Probable CCR4-associated factor 1 homolog 1 (sp|Q9SHJ0|CAF1A_ARATH) Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AT1G06450.1); CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT scaffold00021:562966..563904 2
Ciunshiu_m22643.g gene: Transcription factor MYB90 (sp|Q9ZTC3|MYB90_ARATH) myb domain protein 114 (AT1G66380.1); MYB-LIKE DNA-binding protein MYB scaffold00021:724116..732889 2
Ciunshiu_m22646.g gene: Transcription factor DYT1 (sp|O81900|DYT1_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G21330.1) scaffold00021:771360..772275 2
Ciunshiu_m22667.g gene: Mediator of RNA polymerase II transcription subunit (AT2G01300.1) scaffold00021:965069..965521 2
Ciunshiu_m22740.g gene: Transcription factor BEE 3 (sp|Q8GWK7|BEE3_ARATH) BR enhanced expression 1 (AT1G18400.1); STEROL regulatory element-binding protein scaffold00021:1306775..1308682 2
Ciunshiu_m25638.g gene: Transcription factor bHLH13 (sp|Q9LNJ5|BH013_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G01260.2); MYC scaffold00030:193381..195222 2
Ciunshiu_m25652.g gene: Transcription factor MYB3 (sp|Q9S9K9|MYB3_ARATH) myb domain protein 6 (AT4G09460.1); MYB-LIKE DNA-binding protein MYB scaffold00030:300933..302017 2
Ciunshiu_m25656.g gene: Serine/arginine-rich splicing factor RS31 (sp|P92964|SRS31_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT3G61860.1); SPLICING factor, ARGININE/SERINE-rich scaffold00030:347488..350914 2
Ciunshiu_m25670.g gene: Transcription factor bHLH14 (sp|O23090|BH014_ARATH) Basic helix-loop-helix (bHLH) DNA-binding family protein (AT1G32640.1); MYC scaffold00030:512953..514500 2
Ciunshiu_m28913.g gene: Transcription factor bHLH67 (sp|Q700E4|BH067_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT3G61950.4); MAX DIMERIZATION, MAD scaffold00030:694597..698498 2
Ciunshiu_m25700.g gene: Transcription factor bHLH67 (sp|Q700E4|BH067_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT3G61950.4); MAX DIMERIZATION, MAD scaffold00030:694797..698498 2
Ciunshiu_m28917.g gene: Homeobox protein knotted-1-like 3 (sp|O04136|KNAP3_MALDO) homeobox protein knotted-1-like 3 (AT5G25220.1); HOMEObox protein TRANSCRIPTION factorS scaffold00030:1106262..1113113 2
Ciunshiu_m25769.g gene: Homeobox protein knotted-1-like 3 (sp|O04136|KNAP3_MALDO) homeobox protein knotted-1-like 3 (AT5G25220.1); HOMEObox protein TRANSCRIPTION factorS scaffold00030:1106508..1110990 2
Ciunshiu_m08004.g gene: AP2-like ethylene-responsive transcription factor AIL1 (sp|Q1PFE1|AIL1_ARATH) Integrase-type DNA-binding superfamily protein (AT1G72570.1) scaffold00007:394582..398306 2
Ciunshiu_m08034.g gene: Transcription factor MYB26 (sp|Q9SPG3|MYB26_ARATH) myb domain protein 26 (AT3G13890.2); MYB-LIKE DNA-binding protein MYB scaffold00007:758347..759836 2
Ciunshiu_m08059.g gene: Mediator of RNA polymerase II transcription subunit 9 (sp|Q8RWA2|MED9_ARATH) mediator of RNA polymerase II transcription subunit-like protein (AT1G55080.1) scaffold00007:830319..832782 2
Ciunshiu_m08109.g gene: Transcription factor bHLH87 (sp|Q8S3D2|BH087_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT3G21330.1); STEROL regulatory element-binding protein scaffold00007:1318443..1319952 2
Ciunshiu_m08178.g gene: Mediator of RNA polymerase II transcription subunit 18 (sp|Q9SJZ6|MED18_ARATH) mediator of RNA polymerase II transcription subunit (AT2G22370.1); MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 scaffold00007:1752087..1755973 2
Ciunshiu_m08203.g gene: Transcription factor MYB108 (sp|Q9LDE1|MY108_ARATH) myb domain protein 78 (AT5G49620.1); MYB-LIKE DNA-binding protein MYB scaffold00007:1902003..1906385 2
Ciunshiu_m08201.g gene: Transcription factor bHLH94 (sp|Q9SK91|BH094_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G72210.1); MAX DIMERIZATION, MAD scaffold00007:1983041..1984776 2
Ciunshiu_m08293.g gene: Transcription factor bHLH25 (sp|Q9T072|BH025_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT4G37850.2); CIRCADIAN protein CLOCK/ARNT/BMAL/PAS scaffold00007:2730457..2741920 2
Ciunshiu_m05916.g gene: Transcription factor MYB46 (sp|Q9LXV2|MYB46_ARATH) myb domain protein 83 (AT3G08500.1); MYB-LIKE DNA-binding protein MYB scaffold00037:554993..557070 2
Ciunshiu_m05963.g gene: AP2-like ethylene-responsive transcription factor PLT2 (sp|Q5YGP7|PLET2_ARATH) Integrase-type DNA-binding superfamily protein (AT1G51190.1) scaffold00037:900287..902968 2
Ciunshiu_m11724.g gene: Transcription factor GAMYB (sp|Q0JIC2|GAM1_ORYSJ) myb domain protein 120 (AT5G55020.1); MYB-LIKE DNA-binding protein MYB scaffold00033:125216..127633 2
Ciunshiu_m11788.g gene: Inhibitor of trypsin and hageman factor (sp|P19873|ITH5_CUCMA) scaffold00033:1095617..1096052 2
Ciunshiu_m18715.g gene: Trihelix transcription factor GT-3b (sp|O80450|TGT3B_ARATH) Homeodomain-like superfamily protein (AT2G38250.1); C2H2- zinc finger protein family scaffold00001:17403..18788 2
Ciunshiu_m18724.g gene: Transcription factor TGA7 (sp|Q93ZE2|TGA7_ARATH) RESPONSE TO ABA AND SALT 1 (AT1G09950.1); CAMP-RESPONSE element binding protein-related scaffold00001:86446..87191 2
Ciunshiu_m18785.g gene: Macrophage migration inhibitory factor homolog (sp|P91850|MIFH_BRUMA) Tautomerase/MIF superfamily protein (AT5G01650.4); Macrophage migration inhibitory factor scaffold00001:521310..522364 2
Ciunshiu_m18783.g gene: Macrophage migration inhibitory factor homolog (sp|P81748|MIFH_TRITR) Tautomerase/MIF superfamily protein (AT3G51660.1); Macrophage migration inhibitory factor scaffold00001:523113..524751 2
Ciunshiu_m18789.g gene: Probable WRKY transcription factor 33 (sp|Q8S8P5|WRK33_ARATH) WRKY DNA-binding protein 33 (AT2G38470.1); NITRATE, FROMATE, IRON DEHYDROGENASE scaffold00001:625753..629672 2
Ciunshiu_m18849.g gene: Probable WRKY transcription factor 70 (sp|Q9LY00|WRK70_ARATH) WRKY DNA-binding protein 70 (AT3G56400.1); DNA-binding WRKY scaffold00001:1165414..1167046 2
Ciunshiu_m18909.g gene: Cleavage stimulation factor subunit 77 (sp|Q8GUP1|CTF77_ARATH) Tetratricopeptide repeat (TPR)-like superfamily protein (AT1G17760.1); RNA CLEAVAGE STIMULATION factor scaffold00001:1566845..1577211 2
Ciunshiu_m18998.g gene: Guanine nucleotide exchange factor SPIKE 1 (sp|Q8SAB7|SPK1_ARATH) guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein (AT4G16340.1); Dedicator of cytokinesis scaffold00001:2147576..2165365 2
Ciunshiu_m19089.g gene: Pre-mRNA-splicing factor RSE1 (sp|Q4PGM6|RSE1_USTMA) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (AT3G11960.3); DNA REPAIR/RNA PROCESSING CPSF family scaffold00001:2865413..2870459 2
Ciunshiu_m19094.g gene: TNF receptor-associated factor 5 (sp|O00463|TRAF5_HUMAN) TRAF-like superfamily protein (AT3G11950.3); TNF RECEPTOR ASSOCIATED factor scaffold00001:2892516..2895165 2
Ciunshiu_m19103.g gene: Eukaryotic translation initiation factor 3 subunit C (sp|Q9XHM1|EIF3C_MEDTR) eukaryotic translation initiation factor 3C (AT3G56150.2); EUKARYOTIC TRANSLATION INITATION factor 3, SUBUNIT 8 (EIF3S8)-related scaffold00001:2895482..2899988 2
Ciunshiu_m19101.g gene: Elongation factor Tu GTP-binding domain-containing protein 1 (sp|Q8C0D5|ETUD1_MOUSE) Ribosomal protein S5/Elongation factor G/III/V family protein (AT3G22980.3); TRANSLATION factor scaffold00001:2943890..2944279 2
Ciunshiu_m19165.g gene: BEL1-like homeodomain protein 1 (sp|Q9SJ56|BLH1_ARATH) BEL1-like homeodomain 1 (AT2G35940.2); HOMEObox protein TRANSCRIPTION factorS scaffold00001:3398460..3402783 2
Ciunshiu_m19167.g gene: Mediator of RNA polymerase II transcription subunit 27 (sp|Q8RWM3|MED27_ARATH) mediator of RNA polymerase II transcription subunit (AT3G09180.3); 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-related scaffold00001:3462381..3467191 2
Ciunshiu_m19183.g gene: Transcription repressor OFP6 (sp|Q3EAL1|OFP6_ARATH) Ovate family protein (AT2G36026.1); PROKAR_LIPOprotein scaffold00001:3618499..3619107 2
Ciunshiu_m19196.g gene: Probable CCR4-associated factor 1 homolog 11 (sp|Q9FMS6|CAF1K_ARATH) Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AT5G22250.1); CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT scaffold00001:3641218..3642060 2
Ciunshiu_m19182.g gene: Serine/arginine-rich splicing factor 4 (sp|Q8VE97|SRSF4_MOUSE); RNA-binding domain, RBD scaffold00001:3651089..3658591 2
Ciunshiu_m19198.g gene: B3 domain-containing protein At2g36080 (sp|Q8GYJ2|Y2608_ARATH) AP2/B3-like transcriptional factor family protein (AT2G36080.3) scaffold00001:3724407..3725962 2
Ciunshiu_m19272.g gene: Protein ABSCISIC ACID-INSENSITIVE 5 (sp|Q9SJN0|ABI5_ARATH) Basic-leucine zipper (bZIP) transcription factor family protein (AT2G36270.2); CAMP-RESPONSE element binding protein-related scaffold00001:4126816..4128560 2
Ciunshiu_m19289.g gene: General transcription factor 3C polypeptide 2 (sp|Q8WUA4|TF3C2_HUMAN) Transducin/WD40 repeat-like superfamily protein (AT1G19485.1) scaffold00001:4298804..4306410 2
Ciunshiu_m19298.g gene: DNA-binding protein EMBP-1 (sp|P25032|EMBP1_WHEAT) Basic-leucine zipper (bZIP) transcription factor family protein (AT1G19490.1); Basic-leucine zipper domain scaffold00001:4311881..4315339 2
Ciunshiu_m19383.g gene: Mediator of RNA polymerase II transcription subunit 15a (sp|F4I171|MD15A_ARATH) mediator of RNA polymerase II transcription subunit 15a-like protein (AT1G15780.3) scaffold00001:5076079..5078596 2
Ciunshiu_m11132.g gene: MADS-box protein JOINTLESS (sp|Q9FUY6|JOIN_SOLLC) K-box region and MADS-box transcription factor family protein (AT2G22540.1); MADS box protein scaffold00014:190413..196478 2
Ciunshiu_m11161.g gene: Transcription factor bHLH94 (sp|Q9SK91|BH094_ARATH) basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT1G72210.1); MAX DIMERIZATION, MAD scaffold00014:553759..555212 2
Ciunshiu_m11208.g gene: Transcription factor MYB39 (sp|Q8GWP0|MYB39_ARATH) myb domain protein 93 (AT1G34670.1); MYB-LIKE DNA-binding protein MYB scaffold00014:929999..931249 2
Ciunshiu_m11270.g gene: Probable eukaryotic translation initiation factor 5-2 (sp|Q9S825|IF5Z_ARATH) Translation initiation factor IF2/IF5 (AT1G77840.1); PROKAR_LIPOprotein scaffold00014:1424448..1427546 2
Ciunshiu_m01573.g gene: Transcription factor WER (sp|Q9SEI0|WER_ARATH) myb domain protein 66 (AT5G14750.1); MYB-LIKE DNA-binding protein MYB scaffold00035:555231..556587 2
Ciunshiu_m01599.g gene: ADP-ribosylation factor 1 (sp|Q06396|ARF1_ORYSJ) Ras-related small GTP-binding family protein (AT2G47170.1); ADP RIBOSYLATION factor-related scaffold00035:691100..694573 2
Ciunshiu_m01591.g gene: Transcription factor MYB98 (sp|Q9S7L2|MYB98_ARATH) myb domain protein 118 (AT3G27785.1); MYB-LIKE DNA-binding protein MYB scaffold00035:766011..768878 2
Ciunshiu_m23184.g gene: Splicing factor 3B subunit 3 (sp|Q921M3|SF3B3_MOUSE) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (AT3G55220.1); DNA REPAIR/RNA PROCESSING CPSF family scaffold00028:578220..583318 2
Ciunshiu_m23219.g gene: Clumping factor A (sp|Q6GIK4|CLFA_STAAR) hypothetical protein (AT5G13590.1) scaffold00028:726506..730618 2
Ciunshiu_m23215.g gene: Serine/arginine-rich splicing factor RS2Z33 (sp|Q8VYA5|RSZ33_ARATH) arginine/serine-rich zinc knuckle-containing protein 33 (AT2G37340.1); SPLICING factor, ARGININE/SERINE-rich scaffold00028:742702..746284 2
Ciunshiu_m23256.g gene: Translation initiation factor eIF-2B subunit beta (sp|Q54EY2|EI2BB_DICDI) NagB/RpiA/CoA transferase-like superfamily protein (AT3G07300.1); TRANSLATION INITIATION factor EIF-2B scaffold00028:1154044..1157085 2
Ciunshiu_m15157.g gene: SWR1-complex protein 4 (sp|Q8VZL6|SWC4_ARATH) myb-like transcription factor family protein (AT2G47210.3); SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1 scaffold00026:271245..277324 2
Ciunshiu_m15165.g gene: Transcription factor MYB108 (sp|Q9LDE1|MY108_ARATH) myb domain protein 78 (AT5G49620.1); MYB-LIKE DNA-binding protein MYB scaffold00026:299639..301019 2
Ciunshiu_m15213.g gene: Transcription factor MYB86 (sp|Q8LPH6|MYB86_ARATH) myb domain protein 55 (AT4G01680.3); MYB-LIKE DNA-binding protein MYB scaffold00026:698080..700035 2
Ciunshiu_m15246.g gene: B3 domain-containing protein Os03g0120900 (sp|Q8LMR9|Y3209_ORYSJ) AP2/B3-like transcriptional factor family protein (AT2G46870.1) scaffold00026:967169..968999 2
Ciunshiu_m15282.g gene: Cellulose synthase A catalytic subunit 1 [UDP-forming] (sp|O48946|CESA1_ARATH) cellulose synthase 1 (AT4G32410.1); X-box TRANSCRIPTION factor-related scaffold00026:1185803..1193253 2
Ciunshiu_m20842.g gene: Transcription factor bHLH155 (sp|Q58G01|LHWL3_ARATH) basic helix loop helix (bHLH) DNA-binding superfamily protein (AT1G06150.1); SERINE/THREONINE-protein kinase WNK (WITH NO LYSINE)-related scaffold00056:17502..23042 1
Ciunshiu_m16745.g gene: Translation initiation factor eIF-2B subunit epsilon (sp|Q54RF3|EI2BE_DICDI) Trimeric LpxA-like enzyme (AT2G34970.1); SUGAR-1-PHOSPHATE GUANYL TRANSFERASE scaffold00011:35295..43326 1
Ciunshiu_m16806.g gene: NF-X1-type zinc finger protein NFXL2 (sp|Q9FFK8|NFXL2_ARATH) NF-X1-type zinc finger protein NFXL2 (AT5G05660.1); NUCLEAR TRANSCRIPTION factor, X-box binding 1 (NFX1) scaffold00011:605336..610776 1
Ciunshiu_m16811.g gene: CTD small phosphatase-like protein (sp|Q9PTJ6|CTDSL_CHICK) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AT3G55960.1); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00011:623303..626716 1
Ciunshiu_m26080.g gene: Ataxin-7-like protein 3 (sp|A1L209|AT7L3_DANRE) SAGA-associated factor-like protein (AT5G58575.2); SAGA complex, Sgf11 subunit scaffold00006:256720..258316 1
Ciunshiu_m26170.g gene: Serine/arginine-rich splicing factor SR45a (sp|Q84TH4|SR45A_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT1G07350.1); TRANSFORMER-2-related scaffold00006:710760..713796 1
Ciunshiu_m26249.g gene: Serine/arginine repetitive matrix protein 1 (sp|Q5ZMJ9|SRRM1_CHICK) splicing factor PWI domain-containing protein (AT2G29210.2); SERINE/ARGININE REGULATED NUCLEAR MATRIX protein scaffold00006:1101922..1108347 1
Ciunshiu_m26319.g gene: Probable mediator of RNA polymerase II transcription subunit 37c (sp|Q9LHA8|MD37C_ARATH) heat shock protein 70 (AT3G12580.1); HEAT SHOCK protein 70KDA scaffold00006:1611016..1612407 1
Ciunshiu_m26337.g gene: THO complex subunit 4A (sp|Q8L773|THO4A_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT5G59950.5); RNA AND EXPORT factor binding protein scaffold00006:1712528..1717654 1
Ciunshiu_m26366.g gene: Probable NOT transcription complex subunit VIP2 (Fragment) (sp|Q52JK6|VIP2_NICBE) NOT2 / NOT3 / NOT5 family (AT1G07705.2); CCR4 NOT-related scaffold00006:1965426..1971702 1
Ciunshiu_m26409.g gene: DDB1- and CUL4-associated factor 8 (sp|Q8N7N5|DCAF8_MOUSE) Transducin/WD40 repeat-like superfamily protein (AT3G45620.1); WD repeat domain-containing family scaffold00006:2342521..2345482 1
Ciunshiu_m28975.g gene: Adenylate kinase isoenzyme 6 homolog (sp|Q9FJI1|KAD6_ARATH) P-loop containing nucleoside triphosphate hydrolases superfamily protein (AT5G60340.1); POS9-ACTIVATING factor FAP7-related scaffold00006:2489451..2494860 1
Ciunshiu_m10468.g gene: Mitochondrial import inner membrane translocase subunit TIM50 (sp|Q8VYE2|TIM50_ARATH) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AT1G55900.1); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00040:430488..433952 1
Ciunshiu_m10488.g gene: RPM1-interacting protein 4 (sp|Q8GYN5|RIN4_ARATH) RPM1-interacting protein 4 (RIN4) family protein (AT5G55850.3); Pathogenic type III effector avirulence factor Avr cleavage site scaffold00040:664951..667884 1
Ciunshiu_m10253.g gene: Mediator of RNA polymerase II transcription subunit-like protein (AT5G17510.2); GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 scaffold00019:426507..429153 1
Ciunshiu_m10348.g gene: ADP-ribosylation factor GTPase-activating protein AGD4 (sp|Q9SMX5|AGD4_ARATH) ARF-GAP domain 4 (AT1G10870.1); CENTAURIN/ARF scaffold00019:1188215..1201220 1
Ciunshiu_m10351.g gene: DEAD-box ATP-dependent RNA helicase 2 (sp|Q94A52|RH2_ARATH) eukaryotic initiation factor 4A-III (AT3G19760.1) scaffold00019:1302441..1306299 1
Ciunshiu_m14226.g gene: Brefeldin A-inhibited guanine nucleotide-exchange protein 2 (sp|Q9LZX8|BIG2_ARATH) SEC7-like guanine nucleotide exchange family protein (AT3G60860.1); GUANYL-NUCLEOTIDE EXCHANGE factor scaffold00015:861790..870805 1
Ciunshiu_m14261.g gene: CRS2-associated factor 1, mitochondrial (sp|Q8VYD9|CAF1M_ARATH) RNA-binding CRS1 / YhbY (CRM) domain-containing protein (AT4G31010.1) scaffold00015:1078581..1081701 1
Ciunshiu_m28092.g gene: Peroxisomal membrane protein 11D (sp|O80845|PX11D_ARATH) peroxin 11D (AT2G45740.1); PEROXISOMAL BIOGENESIS factor 11 scaffold00015:1183331..1188108 1
Ciunshiu_m14274.g gene: Peroxisomal membrane protein 11D (sp|O80845|PX11D_ARATH) peroxin 11D (AT2G45740.2); PEROXISOMAL BIOGENESIS factor 11 scaffold00015:1183412..1188108 1
Ciunshiu_m14305.g gene: Transcription repressor MYB6 (sp|Q38851|MYB6_ARATH) myb domain protein 17 (AT3G61250.1); MYB-LIKE DNA-binding protein MYB scaffold00015:1380234..1382563 1
Ciunshiu_m14364.g gene: Nucleosome-remodeling factor subunit NURF301 (sp|Q9W0T1|NU301_DROME) PHD-finger and DNA binding domain-containing protein (AT5G12400.1); FALZ-related BROMOdomain-containing proteinS scaffold00015:1665327..1675800 1
Ciunshiu_m02245.g gene: Post-GPI attachment to proteins factor 3 (sp|A8WFS8|PGAP3_DANRE) Per1-like family protein (AT1G16560.1); Per1-like scaffold00029:177052..181527 1
Ciunshiu_m02310.g gene: Mitochondrial carrier protein MTM1 (sp|Q944H5|MTM1_ARATH) manganese tracking factor for mitochondrial SOD2 (AT4G27940.1) scaffold00029:719527..723495 1
Ciunshiu_m07343.g gene: PAX-interacting protein 1 (sp|A0JNA8|PAXI1_BOVIN) N-acetyltransferase (AT2G41450.1); PAX TRANSCRIPTION ACTIVATION domain INTERACTING protein scaffold00049:466831..473442 1
Ciunshiu_m28395.g gene: Ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547) (AT4G37080.4) scaffold00009:364943..368728 1
Ciunshiu_m18198.g gene: 26S proteasome non-ATPase regulatory subunit 14 homolog (sp|Q9LT08|PSDE_ARATH) Mov34/MPN/PAD-1 family protein (AT5G23540.1); EUKARYOTIC TRANSLATION INITIATION factor 3 -related scaffold00009:474590..477844 1
Ciunshiu_m18236.g gene: ABSCISIC ACID-INSENSITIVE 5-like protein 5 (sp|Q9M7Q4|AI5L5_ARATH) abscisic acid responsive elements-binding factor 2 (AT1G45249.6); CAMP-RESPONSE element binding protein-related scaffold00009:659413..662148 1
Ciunshiu_m18285.g gene: Transcription factor bHLH155 (sp|Q58G01|LHWL3_ARATH) Serine/threonine-protein kinase WNK (With No Lysine)-like protein (AT1G60060.1); SERINE/THREONINE-protein kinase WNK (WITH NO LYSINE)-related scaffold00009:898896..901117 1
Ciunshiu_m18296.g gene: MFP1 attachment factor 1 (sp|Q9M7N6|MAF1_SOLLC) WPP domain protein 1 (AT5G43070.1); WPP domain scaffold00009:1010709..1011341 1
Ciunshiu_m18376.g gene: Transcription repressor MYB6 (sp|Q38851|MYB6_ARATH) myb domain protein 4 (AT4G38620.1); MYB-LIKE DNA-binding protein MYB scaffold00009:1508953..1510153 1
Ciunshiu_m00877.g gene: Succinate dehydrogenase assembly factor 4, mitochondrial (sp|Q54Y25|SDHF4_DICDI); Protein of unknown function DUF1674 scaffold00013:166683..167021 1
Ciunshiu_m00975.g gene: Dehydration-responsive element-binding protein 1D (sp|Q9FJ93|DRE1D_ARATH) C-repeat-binding factor 4 (AT5G51990.1) scaffold00013:824642..825286 1
Ciunshiu_m00983.g gene: Post-GPI attachment to proteins factor 3 (sp|A8WFS8|PGAP3_DANRE) Per1-like family protein (AT1G16560.3); Per1-like scaffold00013:827060..830998 1
Ciunshiu_m16054.g gene: Hsp70 nucleotide exchange factor FES1 (sp|Q0V4C4|FES1_PHANO) Fes1A (AT3G09350.1); protein FOLDING REGULATOR scaffold00041:700387..703068 1
Ciunshiu_m23845.g gene: Pre-mRNA-splicing factor brr2 (sp|Q9UT24|BRR2_SCHPO) U5 small nuclear ribonucleoprotein helicase (AT1G20960.2); HELICASE SKI2W scaffold00051:727275..728561 1
Ciunshiu_m25489.g gene: Lachrymatory-factor synthase (sp|P59082|LFS_ALLCE) Polyketide cyclase/dehydrase and lipid transport superfamily protein (AT4G32870.1); Bet v1-like scaffold00044:648240..648758 1
Ciunshiu_m25494.g gene: Cytosolic Fe-S cluster assembly factor NBP35 (sp|Q8H1Q2|NBP35_ARATH) nucleotide binding protein 35 (AT5G50960.1); Mrp/NBP35 ATP-binding protein scaffold00044:760096..770216 1
Ciunshiu_m25503.g gene: ATP synthase mitochondrial F1 complex assembly factor 2 (sp|Q91YY4|ATPF2_MOUSE) ATP12 protein-like protein (AT5G40660.1); ATP12, ATPase F1F0-assembly protein scaffold00044:1032084..1035454 1
Ciunshiu_m25125.g gene: Transcription repressor MYB5 (sp|Q38850|MYB5_ARATH) myb domain protein 5 (AT3G13540.1); MYB-LIKE DNA-binding protein MYB scaffold00010:437708..438683 1
Ciunshiu_m25166.g gene: Replication factor C subunit 3 (sp|Q8VXX4|RFC3_ARATH) ATPase family associated with various cellular activities (AAA) (AT5G27740.1); replication factor C / DNA POLYMERASE III GAMMA-TAU SUBUNIT scaffold00010:782158..786630 1
Ciunshiu_m25194.g gene: Ninja-family protein AFP3 (sp|Q94F39|AFP3_ARATH) nuclear transport factor 2/RNA recognition motif protein (AT3G07255.1); Ninja scaffold00010:1050019..1053275 1
Ciunshiu_m25224.g gene: RPM1-interacting protein 4 (sp|Q8GYN5|RIN4_ARATH) RPM1 interacting protein 4 (AT3G25070.2); Pathogenic type III effector avirulence factor Avr cleavage site scaffold00010:1126032..1129672 1
Ciunshiu_m25260.g gene: Sm-like protein LSM5 (sp|Q9FKB0|LSM5_ARATH); mRNA splicing factor, thioredoxin-like U5 snRNP scaffold00010:1426456..1431804 1
Ciunshiu_m28882.g gene: Thioredoxin-like protein 4B (sp|Q9NX01|TXN4B_HUMAN) mRNA splicing factor, thioredoxin-like U5 snRNP (AT3G24730.1) scaffold00010:1426456..1435249 1
Ciunshiu_m28887.g gene: Pre-mRNA-processing factor 39 (sp|Q4KLU2|PRP39_XENLA) Tetratricopeptide repeat (TPR)-like superfamily protein (AT1G04080.4); PRE-MRNA PROCESSING protein PRP39-related scaffold00010:1932770..1948795 1
Ciunshiu_m25331.g gene: Pre-mRNA-processing factor 39 (sp|Q4KLU2|PRP39_XENLA) Tetratricopeptide repeat (TPR)-like superfamily protein (AT1G04080.4); PRE-MRNA PROCESSING protein PRP39-related scaffold00010:1938940..1948689 1
Ciunshiu_m25376.g gene: Putative lysine-specific demethylase JMJ16 (sp|C0SUT9|JMJ16_ARATH) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G08620.4); JUMONJI domain containing protein scaffold00010:2311476..2317354 1
Ciunshiu_m05207.g gene: Protein argonaute 2 (sp|Q9SHF3|AGO2_ARATH) Argonaute family protein (AT1G31280.1); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00002:215143..220268 1
Ciunshiu_m05208.g gene: Protein argonaute 2 (sp|Q9SHF3|AGO2_ARATH) Argonaute family protein (AT1G31280.1); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00002:229819..234124 1
Ciunshiu_m05224.g gene: Transforming growth factor-beta receptor-associated protein 1 homolog (sp|A4IG72|TGFA1_DANRE) Vacuolar sorting protein 39 (AT1G22860.1); CNH domain containing scaffold00002:349723..359032 1
Ciunshiu_m05328.g gene: ADP-ribosylation factor GTPase-activating protein AGD12 (sp|Q9FVJ3|AGD12_ARATH) ARF-GAP domain 13 (AT4G05330.1); CENTAURIN/ARF scaffold00002:1110243..1114918 1
Ciunshiu_m05326.g gene: DNA-damage-repair/toleration protein DRT111, chloroplastic (sp|P42698|DR111_ARATH) D111/G-patch domain-containing protein (AT1G30480.1); Splicing factor, SPF45 scaffold00002:1160993..1163817 1
Ciunshiu_m05380.g gene: Mediator of RNA polymerase II transcription subunit 19a (sp|Q9FMP0|MD19A_ARATH) mediator of RNA polymerase II transcription subunit 19a-like protein (AT5G12230.1); LUNG CANCER METASTASIS-related (LCMR1) protein scaffold00002:1498249..1501438 1
Ciunshiu_m05397.g gene: Mediator of RNA polymerase II transcription subunit 21 (sp|C0LU16|MED21_ARATH) mediator 21 (AT4G04780.1); RNA POLYMERASE II HOLOenzyme COMPONENT SRB7 scaffold00002:1720150..1722288 1
Ciunshiu_m05413.g gene: Polyadenylation and cleavage factor homolog 4 (sp|Q0WPF2|PCFS4_ARATH) PCF11P-similar protein 4 (AT4G04885.1); PRE-MRNA CLEAVAGE COMPLEX II scaffold00002:1851978..1859566 1
Ciunshiu_m05542.g gene: Probable ADP-ribosylation factor GTPase-activating protein AGD5 (sp|Q9FL69|AGD5_ARATH) ARF-GAP domain 5 (AT5G54310.1); CENTAURIN/ARF scaffold00002:2602284..2607796 1
Ciunshiu_m05566.g gene: Splicing factor 3B subunit 2 (sp|Q13435|SF3B2_HUMAN) proline-rich spliceosome-associated (PSP) family protein (AT4G21660.1) scaffold00002:2858226..2864836 1
Ciunshiu_m05571.g gene: Mediator of RNA polymerase II transcription subunit 16 (sp|F4JGZ1|MED16_ARATH) sensitive to freezing 6 (AT4G04920.1); Protein of unknown function DUF974 scaffold00002:2919841..2934277 1
Ciunshiu_m05589.g gene: Putative nuclear RNA export factor SDE5 (sp|Q9LUQ3|SDE5_ARATH) silencing defective 5 (AT3G15390.1); Uncharacterized scaffold00002:3001105..3007365 1
Ciunshiu_m05714.g gene: 14-3-3-like protein B (sp|P42654|1433B_VICFA) general regulatory factor 12 (AT1G26480.1); 14-3-3 protein scaffold00002:3803123..3806610 1
Ciunshiu_m27468.g gene: 14-3-3-like protein B (sp|P42654|1433B_VICFA) general regulatory factor 12 (AT1G26480.1) scaffold00002:3803123..3807792 1
Ciunshiu_m05754.g gene: Protein STICHEL-like 3 (sp|F4JRP0|STIL3_ARATH) AAA-type ATPase family protein (AT4G18820.1); replication factor C / DNA POLYMERASE III GAMMA-TAU SUBUNIT scaffold00002:4127634..4135694 1
Ciunshiu_m05750.g gene: Transcription repressor OFP5 (sp|Q8VZN1|OFP5_ARATH) ovate family protein 5 (AT4G18830.1); Ovate protein family, C-terminal scaffold00002:4149895..4151187 1
Ciunshiu_m05759.g gene: CTD small phosphatase-like protein (sp|Q9PTJ6|CTDSL_CHICK) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AT5G45700.1); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00002:4178076..4178954 1
Ciunshiu_m28358.g gene: XIAP-associated factor 1 (sp|Q6GPH4|XAF1_HUMAN) TRAF-type zinc finger-like protein (AT1G09920.1); TRAF-TYPE ZINC FINGER protein-related scaffold00042:841874..845689 1
Ciunshiu_m17703.g gene: XIAP-associated factor 1 (sp|Q6GPH4|XAF1_HUMAN) TRAF-type zinc finger-like protein (AT1G09920.1); TRAF-TYPE ZINC FINGER protein-related scaffold00042:841911..845338 1
Ciunshiu_m01731.g gene: CRS2-associated factor 2, chloroplastic (sp|Q9LDA9|CAF2P_ARATH) RNA-binding CRS1 / YhbY (CRM) domain-containing protein (AT1G23400.1) scaffold00004:551156..555314 1
Ciunshiu_m01760.g gene: Pre-mRNA-processing factor 17 (sp|O60508|PRP17_HUMAN) Transducin/WD40 repeat-like superfamily protein (AT1G10580.1) scaffold00004:760753..764221 1
Ciunshiu_m01768.g gene: RNA-binding protein 25 (sp|B2RY56|RBM25_MOUSE) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein (AT1G60200.4); RBM25 protein scaffold00004:796108..803481 1
Ciunshiu_m01785.g gene: Transcription factor EMB1444 (sp|P0C7P8|LHWL1_ARATH) Serine/threonine-protein kinase WNK (With No Lysine)-like protein (AT1G60060.1); SERINE/THREONINE-protein kinase WNK (WITH NO LYSINE)-related scaffold00004:938498..940511 1
Ciunshiu_m01926.g gene: Probable ran guanine nucleotide release factor (sp|Q54ML6|MOG1_DICDI) ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) (AT1G69680.1) scaffold00004:1813844..1816798 1
Ciunshiu_m01931.g gene: TATA box-binding protein-associated factor RNA polymerase I subunit B (sp|Q5XVF0|MEE12_ARATH) maternal effect embryo arrest 12 (AT2G02955.1) scaffold00004:1889013..1893289 1
Ciunshiu_m01981.g gene: Protein argonaute 7 (sp|Q9C793|AGO7_ARATH) Argonaute family protein (AT1G69440.1); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00004:2205279..2209378 1
Ciunshiu_m01982.g gene: Eukaryotic translation initiation factor 5A (sp|Q9AXJ4|IF5A_MANES) Amino acid kinase family protein (AT1G26640.1); GLUTAMATE SEMIALDEHYDE DEHYDROGENASE scaffold00004:2249865..2255314 1
Ciunshiu_m01991.g gene: Mitotic checkpoint protein BUB3.3 (sp|F4I241|BUB33_ARATH) Transducin/WD40 repeat-like superfamily protein (AT1G69400.1); MRNA EXPORT factor AND BUB3 scaffold00004:2256568..2259857 1
Ciunshiu_m02009.g gene: Putative SNAP25 homologous protein SNAP30 (sp|Q9LMG8|SNP30_ARATH) soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (AT5G61210.1); SYNAPTOSOMAL ASSOCIATED protein scaffold00004:2339997..2341367 1
Ciunshiu_m02059.g gene: Integrator complex subunit 9 homolog (sp|A7SBF0|INT9_NEMVE) integrator complex subunit (AT3G07530.2); CLEAVAGE AND POLYADENYLATION SPECIFICITY factor scaffold00004:2630561..2634856 1
Ciunshiu_m02068.g gene: U3 small nucleolar RNA-associated protein 25 (sp|A4R0E6|UTP25_MAGO7) U3 small nucleolar RNA-associated protein (AT1G17690.1); Digestive organ expansion factor, predicted scaffold00004:2725047..2733329 1
Ciunshiu_m02169.g gene: Clustered mitochondria protein (sp|F4J5S1|CLU_ARATH) tetratricopeptide repeat (TPR)-containing protein (AT3G52140.1); EUKARYOTIC TRANSLATION INITIATION factor 3 SUBUNIT (EIF-3) scaffold00004:3287545..3299063 1
Ciunshiu_m02165.g gene: Chaperone protein dnaJ 1, mitochondrial (sp|Q38813|DNAJ1_ARATH) gametophytic factor 2 (AT5G48030.1) scaffold00004:3310928..3316094 1
Ciunshiu_m04906.g gene: CRS2-associated factor 1, chloroplastic (sp|Q9SL79|CAF1P_ARATH) RNA-binding CRS1 / YhbY (CRM) domain-containing protein (AT2G20020.1) scaffold00054:674499..677618 1
Ciunshiu_m04921.g gene: Lachrymatory-factor synthase (sp|P59082|LFS_ALLCE) Polyketide cyclase/dehydrase and lipid transport superfamily protein (AT2G25770.2); Bet v1-like scaffold00054:907149..907694 1
Ciunshiu_m08332.g gene: ENHANCER OF AG-4 protein 2 (sp|Q9XER9|HUA2_ARATH) Tudor/PWWP/MBT domain-containing protein (AT5G23150.2); HEPATOMA-DERIVED GROWTH factor-related scaffold00036:196051..206774 1
Ciunshiu_m08337.g gene: Mediator of RNA polymerase II transcription subunit 36a (sp|Q94AH9|MD36A_ARATH) fibrillarin 2 (AT4G25630.1); RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN scaffold00036:256382..259726 1
Ciunshiu_m24687.g gene: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 (sp|Q54UB1|TRM6_DICDI) eukaryotic initiation factor 3 gamma subunit family protein (AT2G45730.1); Eukaryotic initiation factor 3, gamma subunit scaffold00018:534123..539237 1
Ciunshiu_m24802.g gene: Transcription repressor OFP7 (sp|Q9ZU65|OFP7_ARATH) ovate family protein 7 (AT2G18500.1); Ovate protein family, C-terminal scaffold00018:1461068..1462021 1
Ciunshiu_m27556.g gene: ADP-ribosylation factor GTPase-activating protein AGD7 (sp|O80925|AGD7_ARATH) ARF-GAP domain 7 (AT2G37550.2); CENTAURIN/ARF scaffold00027:465216..471190 1
Ciunshiu_m06866.g gene: THO complex subunit 4A (sp|Q8L773|THO4A_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT5G02530.2); RNA AND EXPORT factor binding protein scaffold00027:643219..646574 1
Ciunshiu_m06872.g gene: Probable mediator of RNA polymerase II transcription subunit 37e (sp|P22953|MD37E_ARATH) heat shock cognate protein 70-1 (AT5G02500.1); HEAT SHOCK protein 70KDA scaffold00027:751250..752980 1
Ciunshiu_m12653.g gene: CCR4-NOT transcription complex subunit 10 (sp|Q08CL8|CNO10_DANRE) Tetratricopeptide repeat (TPR)-like superfamily protein (AT5G35430.1) scaffold00005:1576390..1583096 1
Ciunshiu_m12761.g gene: Brefeldin A-inhibited guanine nucleotide-exchange protein 5 (sp|F4IXW2|BIG5_ARATH) HOPM interactor 7 (AT3G43300.1); GUANYL-NUCLEOTIDE EXCHANGE factor scaffold00005:2278675..2299577 1
Ciunshiu_m12818.g gene: Von Willebrand factor A domain-containing protein DDB_G0292028 (sp|Q54DU5|Y2028_DICDI) inter-alpha-trypsin inhibitor heavy chain-like protein (AT1G19110.1); VON WILLEBRAND factor, TYPE A domain containing scaffold00005:2761231..2768410 1
Ciunshiu_m12815.g gene: Methylthioribose-1-phosphate isomerase (sp|B9RR88|MTNA_RICCO) NagB/RpiA/CoA transferase-like superfamily protein (AT2G05830.1); TRANSLATION INITIATION factor EIF-2B scaffold00005:2776807..2780507 1
Ciunshiu_m12850.g gene: COP9 signalosome complex subunit 6a (sp|Q8W206|CSN6A_ARATH) COP9 signalosome subunit 6A (AT5G56280.1); EUKARYOTIC TRANSLATION INITIATION factor 3 SUBUNIT F-related scaffold00005:2949974..2953977 1
Ciunshiu_m04163.g gene: Transcription repressor MYB4 (sp|Q9SZP1|MYB4_ARATH) myb domain protein 7 (AT2G16720.1); MYB-LIKE DNA-binding protein MYB scaffold00031:247161..248493 1
Ciunshiu_m04209.g gene: DDB1- and CUL4-associated factor 8 (sp|Q8N7N5|DCAF8_MOUSE) Transducin/WD40 repeat-like superfamily protein (AT4G35140.1); WD repeat domain-containing family scaffold00031:569631..573569 1
Ciunshiu_m04306.g gene: Brefeldin A-inhibited guanine nucleotide-exchange protein 1 (sp|F4JSZ5|BIG1_ARATH) SEC7-like guanine nucleotide exchange family protein (AT4G38200.1); GUANYL-NUCLEOTIDE EXCHANGE factor scaffold00031:1089833..1099612 1
Ciunshiu_m04307.g gene: Nucleolar complex protein 4 homolog (sp|Q5ZJC7|NOC4L_CHICK) CCAAT-binding factor (AT2G17250.1); NUCLEOLAR COMPLEX protein 4 scaffold00031:1173438..1177988 1
Ciunshiu_m14013.g gene: Pentatricopeptide repeat-containing protein At3g18970 (sp|Q9LJ69|PP243_ARATH) mitochondrial editing factor 20 (AT3G18970.1) scaffold00024:802345..803925 1
Ciunshiu_m17157.g gene: Pathogenesis-related homeodomain protein (sp|P48786|PRH_PETCR) Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein (AT3G19510.1); POLYCOMB-LIKE TRANSCRIPTION factor scaffold00047:196885..203791 1
Ciunshiu_m17148.g gene: Protein TRI1 (sp|Q05024|TRI1_YEAST) SWIB/MDM2 domain superfamily protein (AT4G34290.1); BRG-1 ASSOCIATED factor 60 (BAF60) scaffold00047:286332..288648 1
Ciunshiu_m17188.g gene: Mitotic checkpoint protein BUB3.2 (sp|Q9C701|BUB32_ARATH) Transducin/WD40 repeat-like superfamily protein (AT1G49910.1); MRNA EXPORT factor AND BUB3 scaffold00047:435942..439826 1
Ciunshiu_m09169.g gene: Protein TSS (sp|F4JKH6|TSS_ARATH) Tetratricopeptide repeat (TPR)-like superfamily protein (AT4G28080.1); EUKARYOTIC TRANSLATION INITIATION factor 3 SUBUNIT (EIF-3) scaffold00045:733852..746744 1
Ciunshiu_m09194.g gene: Eukaryotic translation initiation factor isoform 4G-1 (sp|Q93ZT6|IF4G1_ARATH) MIF4G domain-containing protein / MA3 domain-containing protein (AT5G57870.2); EUKARYOTIC TRANSLATION INITIATION factor 4 GAMMA scaffold00045:887470..893126 1
Ciunshiu_m09201.g gene: APO protein 2, chloroplastic (sp|Q8W4A5|APO2_ARATH) APO RNA-binding protein (DUF794) (AT5G57930.1); EUKARYOTIC TRANSLATION INITIATION factor SUI1 scaffold00045:1017280..1020296 1
Ciunshiu_m20510.g gene: Protein Iojap-related, mitochondrial (sp|Q9CAF9|IOJAM_ARATH) Lojap-related protein (AT1G67620.1); Protein Iojap/ribosomal silencing factor RsfS scaffold00022:385385..388088 1
Ciunshiu_m20531.g gene: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase (sp|Q38953|DHX8_ARATH) RNA helicase family protein (AT1G27900.3); ATP-DEPENDENT RNA HELICASE scaffold00022:473212..482230 1
Ciunshiu_m20534.g gene: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (sp|Q92620|PRP16_HUMAN) RNA helicase family protein (AT5G13010.1); ATP-DEPENDENT RNA HELICASE scaffold00022:557085..567421 1
Ciunshiu_m20567.g gene: CTD small phosphatase-like protein 2 (sp|Q54GB2|CTSL2_DICDI) SCP1-like small phosphatase 5 (AT5G11860.1); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00022:699893..705259 1
Ciunshiu_m20609.g gene: 14-3-3-like protein GF14 iota (sp|Q9C5W6|14312_ARATH) general regulatory factor 12 (AT1G26480.1); 14-3-3 protein scaffold00022:1181256..1184066 1
Ciunshiu_m23440.g gene: Probable glutathione peroxidase 4 (sp|Q8L910|GPX4_ARATH) glutathione peroxidase 4 (AT2G48150.1); HEPATOMA-DERIVED GROWTH factor-related scaffold00012:629893..632499 1
Ciunshiu_m23439.g gene: Protein HUA2-LIKE 3 (sp|F4IZM8|HUAL3_ARATH) Tudor/PWWP/MBT domain-containing protein (AT3G63070.1); HEPATOMA-DERIVED GROWTH factor-related scaffold00012:636599..648856 1
Ciunshiu_m23442.g gene: Mediator of RNA polymerase II transcription subunit 33B (sp|F4IN69|MD33B_ARATH) reduced epidermal fluorescence 4 (AT2G48110.1) scaffold00012:681150..689044 1
Ciunshiu_m23477.g gene: Histidine-containing phosphotransfer protein 5 (sp|Q8L9T7|AHP5_ARATH) histidine-containing phosphotransfer factor 5 (AT1G03430.1); Signal transduction histidine kinase, phosphotransfer (Hpt) domain scaffold00012:888427..892306 1
Ciunshiu_m23493.g gene: PAX-interacting protein 1 (sp|Q6NZQ4|PAXI1_MOUSE) BRCT domain-containing DNA repair protein (AT4G03130.1); PAX TRANSCRIPTION ACTIVATION domain INTERACTING protein scaffold00012:1037377..1041431 1
Ciunshiu_m23538.g gene: Wee1-like protein kinase (sp|Q8L4H0|WEE1_ARATH) WEE1-like kinase (AT1G02970.1); EUKARYOTIC TRANSLATION INITIATION factor 2-ALPHA kinase (EIF2-ALPHA kinase)-related scaffold00012:1338471..1342373 1
Ciunshiu_m23540.g gene: Protein RALF-like 33 (sp|Q8L9P8|RLF33_ARATH) ralf-like 33 (AT4G15800.1); Rapid ALkalinization Factor scaffold00012:1431379..1431832 1
Ciunshiu_m23635.g gene: BRCT domain-containing protein At4g02110 (sp|O04251|Y4211_ARATH) transcription coactivator (AT4G02110.1); DNA replication REGULATOR DPB11-related scaffold00012:2161105..2167363 1
Ciunshiu_m23663.g gene: GTP-binding protein SAR1A (sp|O04834|SAR1A_ARATH) secretion-associated RAS super family 2 (AT4G02080.1); ADP RIBOSYLATION factor-related scaffold00012:2196348..2199908 1
Ciunshiu_m06675.g gene: Protein TRI1 (sp|Q05024|TRI1_YEAST) SWIB/MDM2 domain superfamily protein (AT2G35605.1); BRG-1 ASSOCIATED factor 60 (BAF60) scaffold00032:467064..468752 1
Ciunshiu_m06791.g gene: NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 (sp|Q54S83|NDUF7_DICDI) NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) (AT3G28700.1); Putative S-adenosyl-L-methionine-dependent methyltransferase MidA scaffold00032:1167790..1171290 1
Ciunshiu_m21345.g gene: Ribosome maturation factor RimM (sp|A5GI62|RIMM_SYNPW) 16S rRNA processing protein RimM family (AT5G46420.1); 16S rRNA processing protein RimM scaffold00003:81274..85752 1
Ciunshiu_m21357.g gene: CTD small phosphatase-like protein 2 (sp|Q54GB2|CTSL2_DICDI) SCP1-like small phosphatase 4 (AT5G46410.3); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00003:103204..109478 1
Ciunshiu_m21364.g gene: Pre-mRNA-processing factor 39 (sp|Q4KLU2|PRP39_XENLA) Tetratricopeptide repeat (TPR)-like superfamily protein (AT5G46400.1); PRE-MRNA PROCESSING protein PRP39-related scaffold00003:110878..117640 1
Ciunshiu_m21355.g gene: RNA polymerase II degradation factor-like protein (DUF1296) (AT1G29350.1); APOPTOSIS INHIBITOR 5-related scaffold00003:130984..137404 1
Ciunshiu_m21484.g gene: BAH and coiled-coil domain-containing protein 1 (sp|Q9P281|BAHC1_HUMAN) PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (AT4G22140.1); PHD FINGER TRANSCRIPTION factor scaffold00003:926637..930238 1
Ciunshiu_m21490.g gene: RPM1-interacting protein 4 (sp|Q8GYN5|RIN4_ARATH); Pathogenic type III effector avirulence factor Avr cleavage site scaffold00003:1041355..1042647 1
Ciunshiu_m21495.g gene: Mediator of RNA polymerase II transcription subunit 11 (sp|Q6ID77|MED11_ARATH) Expressed protein (AT3G01435.4); Uncharacterized scaffold00003:1078100..1079768 1
Ciunshiu_m28624.g gene: APO protein 1, chloroplastic (sp|Q9XIR4|APO1_ARATH) APO RNA-binding protein (DUF794) (AT1G64810.1); EUKARYOTIC TRANSLATION INITIATION factor SUI1 scaffold00003:1517093..1522194 1
Ciunshiu_m21599.g gene: APO protein 1, chloroplastic (sp|Q9XIR4|APO1_ARATH) APO RNA-binding protein (DUF794) (AT1G64810.1); EUKARYOTIC TRANSLATION INITIATION factor SUI1 scaffold00003:1519164..1522084 1
Ciunshiu_m21615.g gene: Chromatin structure-remodeling complex protein BSH (sp|P93045|BSH_ARATH) transcription regulatory protein SNF5, putative (BSH) (AT3G17590.1); SNF5/SMARCB1/INI1 scaffold00003:1706732..1709656 1
Ciunshiu_m21670.g gene: Nuclear export mediator factor NEMF (sp|O60524|NEMF_HUMAN) zinc knuckle (CCHC-type) family protein (AT5G49930.1); Uncharacterized scaffold00003:2167573..2173865 1
Ciunshiu_m21680.g gene: 30S ribosomal protein S6 (sp|Q0VMF9|RS6_ALCBS) Translation elongation factor EF1B/ribosomal protein S6 family protein (AT3G17170.1); MITOCHONDRIAL 28S RIBOSOMAL protein S6 scaffold00003:2266156..2268488 1
Ciunshiu_m21712.g gene: CTD small phosphatase-like protein 2 (sp|Q54GB2|CTSL2_DICDI) SCP1-like small phosphatase 5 (AT5G11860.2); NUCLEAR LIM INTERACTOR-INTERACTING factor-related scaffold00003:2438439..2441748 1
Ciunshiu_m21728.g gene: Protein high chlorophyll fluorescent 107 (sp|Q8RWG2|CF107_ARATH) high chlorophyll fluorescent 107 (AT3G17040.1); PRE-MRNA SPLICING factor scaffold00003:2552385..2556909 1
Ciunshiu_m21883.g gene: 60S ribosome subunit biogenesis protein NIP7 homolog (sp|A4QND5|NIP7_XENTR) RNA binding protein (AT4G15770.1); Ribosome biogenesis factor, NIP7 scaffold00003:3526325..3526888 1
Ciunshiu_m21928.g gene: PAX-interacting protein 1 (sp|A0JNA8|PAXI1_BOVIN) BRCT domain-containing DNA repair protein (AT3G21480.1); PAX TRANSCRIPTION ACTIVATION domain INTERACTING protein scaffold00003:3934579..3940127 1
Ciunshiu_m22285.g gene: Ocs element-binding factor 1 (sp|P24068|OCS1_MAIZE) basic leucine-zipper 44 (AT1G75390.1); Basic-leucine zipper domain scaffold00017:671936..672421 1
Ciunshiu_m22315.g gene: Replication factor C subunit 3 (sp|Q8VXX4|RFC3_ARATH) ATPase family associated with various cellular activities (AAA) (AT5G27740.1); replication factor C / DNA POLYMERASE III GAMMA-TAU SUBUNIT scaffold00017:822861..826606 1
Ciunshiu_m22347.g gene: Transcription repressor OFP7 (sp|Q9ZU65|OFP7_ARATH) ovate family protein 7 (AT2G18500.1); Ovate protein family, C-terminal scaffold00017:1157643..1159186 1
Ciunshiu_m22370.g gene: Splicing factor 3B subunit 4 (sp|Q6AYL5|SF3B4_RAT) RNA-binding (RRM/RBD/RNP motifs) family protein (AT2G18510.1) scaffold00017:1181942..1186489 1
Ciunshiu_m15576.g gene: Polynucleotide 5'-hydroxyl-kinase NOL9 (sp|Q8VYP6|NOL9_ARATH) Pre-mRNA cleavage complex II protein family (AT5G11010.3); CLEAVAGE/POLYADENYLATION factor IA SUBUNIT CLP1P scaffold00008:470583..474256 1
Ciunshiu_m15667.g gene: Activating signal cointegrator 1 (sp|Q9QXN3|TRIP4_MOUSE) transcription regulator/ zinc ion binding protein (AT3G47610.1); THYROID RECEPTOR INTERACTING protein related scaffold00008:990907..993661 1
Ciunshiu_m15726.g gene: Serine/arginine-rich splicing factor SR45a (sp|Q84TH4|SR45A_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT4G35785.2); TRANSFORMER-2-related scaffold00008:1396690..1400072 1
Ciunshiu_m15789.g gene: Crooked neck-like protein 1 (sp|P63155|CRNL1_RAT) crooked neck protein, putative / cell cycle protein (AT5G41770.1); PRE-MRNA SPLICING factor scaffold00008:1922833..1927467 1
Ciunshiu_m15833.g gene: F-box protein SKIP8 (sp|Q93YV9|SKIP8_ARATH) Nuclear transport factor 2 (NTF2) family protein (AT4G10925.5) scaffold00008:2240389..2243227 1
Ciunshiu_m15852.g gene: 30S ribosomal protein S6 alpha, chloroplastic (sp|Q8VY91|RR6_ARATH) Translation elongation factor EF1B/ribosomal protein S6 family protein (AT1G64510.2); MITOCHONDRIAL 28S RIBOSOMAL protein S6 scaffold00008:2300207..2302247 1
Ciunshiu_m15857.g gene: Transcription factor LHW (sp|Q9XIN0|LHW_ARATH) Serine/threonine-protein kinase WNK (With No Lysine)-like protein (AT1G64625.2); SERINE/THREONINE-protein kinase WNK (WITH NO LYSINE)-related scaffold00008:2469534..2473859 1
Ciunshiu_m26523.g gene: DDB1- and CUL4-associated factor 4 (sp|Q58DC2|DCAF4_BOVIN) Transducin/WD40 repeat-like superfamily protein (AT5G17370.2); KATANIN P80 SUBUNIT scaffold00050:21908..33461 1
Ciunshiu_m26547.g gene: Polygalacturonase QRT3 (sp|O49432|QRT3_ARATH) Pectin lyase-like superfamily protein (AT4G20050.1); Pectin lyase fold/virulence factor scaffold00050:211357..213506 1
Ciunshiu_m26548.g gene: Polygalacturonase QRT3 (sp|O49432|QRT3_ARATH) Pectin lyase-like superfamily protein (AT4G20040.1); Pectin lyase fold/virulence factor scaffold00050:217471..220610 1
Ciunshiu_m26632.g gene: Transcription repressor MYB6 (sp|Q38851|MYB6_ARATH) myb domain protein 6 (AT4G09460.1); MYB-LIKE DNA-binding protein MYB scaffold00050:800898..801798 1
Ciunshiu_m03570.g gene: Ribosome-binding factor PSRP1, chloroplastic (sp|P19954|PRSP1_SPIOL) 30S ribosomal protein (AT5G24490.1); Ribosomal protein S30Ae/sigma 54 modulation protein scaffold00023:61628..65092 1
Ciunshiu_m03610.g gene: CHD3-type chromatin-remodeling factor PICKLE (sp|Q9S775|PKL_ARATH) chromatin remodeling factor CHD3 (PICKLE) (AT2G25170.4); SWI/SNF-related MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBfamily-related scaffold00023:405450..423123 1
Ciunshiu_m03632.g gene: Nuclear nucleic acid-binding protein C1D (sp|Q5XJ97|C1D_DANRE) Sas10/Utp3/C1D family (AT5G25080.1); Exosome-associated factor Rrp47/DNA strand repair C1D scaffold00023:614155..616604 1
Ciunshiu_m03640.g gene: Eukaryotic translation initiation factor isoform 4G-1 (sp|Q93ZT6|IF4G1_ARATH) MIF4G domain-containing protein / MA3 domain-containing protein (AT5G57870.1); EUKARYOTIC TRANSLATION INITIATION factor 4 GAMMA scaffold00023:634455..639223 1
Ciunshiu_m03693.g gene: Serine/arginine-rich splicing factor RSZ22A (sp|Q9SJA6|RZ22A_ARATH) RNA recognition motif and CCHC-type zinc finger domains containing protein (AT2G24590.1); SPLICING factor, ARGININE/SERINE-rich scaffold00023:1017818..1022413 1
Ciunshiu_m03720.g gene: COP9 signalosome complex subunit 5b (sp|Q8LAZ7|CSN5B_ARATH) COP9-signalosome 5B (AT1G71230.1); EUKARYOTIC TRANSLATION INITIATION factor 3 -related scaffold00023:1177009..1180784 1
Ciunshiu_m03721.g gene: Cytoplasmic 60S subunit biogenesis factor SPCC550.15c (sp|O59811|REI1_SCHPO) Zinc finger protein 622 (AT4G31420.1); ZINC FINGER protein 622 scaffold00023:1206544..1209254 1
Ciunshiu_m02581.g gene: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 (sp|A7YVD7|NDUF6_BOVIN) Terpenoid synthases superfamily protein (AT1G62730.1) scaffold00020:652835..655715 1
Ciunshiu_m22583.g gene: Arginine/serine-rich coiled-coil protein 2 (sp|Q7L4I2|RSRC2_HUMAN) pre-mRNA-splicing factor (AT3G56720.2); Small acidic protein-like domain scaffold00021:385077..389691 1
Ciunshiu_m22612.g gene: THO complex subunit 4D (sp|Q6NQ72|THO4D_ARATH) ALWAYS EARLY 4 (AT5G37720.1); RNA AND EXPORT factor binding protein scaffold00021:497300..502695 1
Ciunshiu_m22665.g gene: Protein AAR2 homolog (sp|Q08DJ7|AAR2_BOVIN) AAR2 protein family (AT1G66510.2); A1 cistron-splicing factor, AAR2 scaffold00021:884743..890500 1
Ciunshiu_m22732.g gene: Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (sp|Q6YYA3|CRS1_ORYSJ) maize chloroplast splicing factor-like protein (AT5G16180.1) scaffold00021:1215127..1219891 1
Ciunshiu_m22764.g gene: 14-3-3-like protein (sp|P93259|1433_MESCR) general regulatory factor 5 (AT5G16050.2); 14-3-3 protein scaffold00021:1511874..1515108 1
Ciunshiu_m22772.g gene: AP2/ERF and B3 domain-containing transcription repressor RAV2 (sp|P82280|RAV2_ARATH) related to ABI3/VP1 2 (AT1G68840.1) scaffold00021:1575625..1576542 1
Ciunshiu_m25604.g gene: Protein SDE2 homolog (sp|Q5BJN8|SDE2_RAT) Ubiquitin-like superfamily protein (AT4G01000.2); SPLICING factor SF3A-related scaffold00030:67995..70531 1
Ciunshiu_m25616.g gene: Protein TSS (sp|F4JKH6|TSS_ARATH) Tetratricopeptide repeat (TPR)-like superfamily protein (AT1G01320.1); EUKARYOTIC TRANSLATION INITIATION factor 3 SUBUNIT (EIF-3) scaffold00030:105639..121535 1
Ciunshiu_m28910.g gene: Serine/arginine-rich splicing factor RS31 (sp|P92964|SRS31_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT3G61860.1) scaffold00030:347488..350946 1
Ciunshiu_m07985.g gene: Multiple organellar RNA editing factor 7, mitochondrial (sp|Q9CAH0|MORF7_ARATH) plastid developmental protein DAG (AT1G72530.1) scaffold00007:312102..314061 1
Ciunshiu_m08022.g gene: Telomere repeat-binding factor 4 (sp|F4I7L1|TRB4_ARATH) Homeodomain-like/winged-helix DNA-binding family protein (AT1G17520.4); HISTONE H1/H5 scaffold00007:681538..685053 1
Ciunshiu_m27639.g gene: Telomere repeat-binding factor 4 (sp|F4I7L1|TRB4_ARATH) Homeodomain-like/winged-helix DNA-binding family protein (AT1G17520.4); TELOMERIC repeat binding protein scaffold00007:681538..685236 1
Ciunshiu_m27641.g gene: Mediator of RNA polymerase II transcription subunit 9 (sp|Q8RWA2|MED9_ARATH) mediator of RNA polymerase II transcription subunit-like protein (AT1G55080.1); beta-sandwich domain of Sec23/24 scaffold00007:830297..832782 1
Ciunshiu_m08115.g gene: Mediator of RNA polymerase II transcription subunit 6 (sp|F4IXJ7|MED6_ARATH) RNA polymerase transcriptional regulation mediator-like protein (AT3G21350.1); Mediator complex, subunit Med6, metazoa/plant scaffold00007:1308845..1312749 1
Ciunshiu_m08127.g gene: Hepatocyte growth factor-regulated tyrosine kinase substrate (sp|Q99LI8|HGS_MOUSE) ENTH/VHS/GAT family protein (AT5G63640.1); VHS domain containing protein family scaffold00007:1454196..1460978 1
Ciunshiu_m08231.g gene: 14-3-3-like protein GF14 kappa (sp|P48348|14338_ARATH) G-box regulating factor 6 (AT5G10450.1); 14-3-3 domain scaffold00007:2110702..2114693 1
Ciunshiu_m11738.g gene: Protein suppressor of white apricot (sp|P12297|SUWA_DROME) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (AT5G55100.1); SPLICING factor (SUPPRESSOR OF WHITE APRICOT) scaffold00033:307567..311984 1
Ciunshiu_m13743.g gene: BUD13 homolog (sp|Q5ZIJ0|BUD13_CHICK) pre-mRNA-splicing factor of RES complex protein (AT1G31870.2) scaffold00055:585184..590457 1
Ciunshiu_m18778.g gene: Patellin-6 (sp|Q9SCU1|PATL6_ARATH) SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (AT3G51670.1); SEC14 related protein scaffold00001:564074..566299 1
Ciunshiu_m18800.g gene: Wound-induced protein 1 (sp|P20144|WUN1_SOLTU) Nuclear transport factor 2 (NTF2) family protein (AT5G01740.1); NTF2-like scaffold00001:692668..693281 1
Ciunshiu_m18818.g gene: Transcription repressor OFP4 (sp|F4HNU8|OFP4_ARATH) ovate family protein 2 (AT2G30400.1); Ovate protein family, C-terminal scaffold00001:954305..955564 1
Ciunshiu_m18852.g gene: B3 domain-containing transcription repressor VAL2 (sp|Q5CCK4|VAL2_ARATH) HSI2-like 1 (AT4G32010.1); ZINC FINGER CW-TYPE COILED-COIL domain protein 3. scaffold00001:1101831..1109129 1
Ciunshiu_m18891.g gene: Mediator of RNA polymerase II transcription subunit 33A (sp|Q9LUG9|MD33A_ARATH) REF4-related 1 (AT3G23590.1) scaffold00001:1423149..1431387 1
Ciunshiu_m19086.g gene: DNA damage-binding protein 1 (sp|Q6QNU4|DDB1_SOLLC) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (AT3G11960.2); DNA REPAIR/RNA PROCESSING CPSF family scaffold00001:2880062..2884183 1
Ciunshiu_m19087.g gene: Mediator of RNA polymerase II transcription subunit 7a (sp|Q9LYW3|MED7A_ARATH) Mediator complex, subunit Med7 (AT5G03220.1); Mediator complex, subunit Med7 scaffold00001:2884914..2888460 1
Ciunshiu_m19192.g gene: Transcription repressor OFP15 (sp|Q9SJ45|OPF15_ARATH) ovate family protein 13 (AT5G04820.1); Ovate protein family, C-terminal scaffold00001:3629071..3630230 1
Ciunshiu_m19245.g gene: Protein argonaute MEL1 (sp|Q851R2|MEL1_ORYSJ) Argonaute family protein (AT2G27880.1); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00001:3917385..3924356 1
Ciunshiu_m19317.g gene: Polyadenylation and cleavage factor homolog 4 (sp|Q0WPF2|PCFS4_ARATH) pre-mRNA cleavage complex 2 Pcf11-like protein (AT2G36480.2); PRE-MRNA CLEAVAGE COMPLEX II scaffold00001:4551272..4558168 1
Ciunshiu_m28469.g gene: Protein argonaute 4B (sp|Q0JF58|AGO4B_ORYSJ) Argonaute family protein (AT2G27040.2); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00001:4987928..4993660 1
Ciunshiu_m19389.g gene: Protein argonaute 4 (sp|Q9ZVD5|AGO4_ARATH) Argonaute family protein (AT2G27040.2); EUKARYOTIC TRANSLATION INITIATION factor 2C scaffold00001:4989701..4993660 1
Ciunshiu_m11135.g gene: 14-3-3-like protein B (Fragment) (sp|Q96451|1433B_SOYBN) general regulatory factor 8 (AT5G65430.1); 14-3-3 protein scaffold00014:340937..344085 1
Ciunshiu_m11187.g gene: 14-3-3-like protein (sp|P46266|1433_PEA) general regulatory factor 2 (AT1G78300.1); 14-3-3 protein scaffold00014:713733..718238 1
Ciunshiu_m11204.g gene: 14-3-3 protein 7 (sp|P93212|14337_SOLLC) general regulatory factor 10 (AT1G22300.1); 14-3-3 protein scaffold00014:896008..898592 1
Ciunshiu_m11269.g gene: Protein GrpE (sp|Q8DJB3|GRPE_THEEB) Co-chaperone GrpE family protein (AT1G36390.1); GrpE nucleotide exchange factor scaffold00014:1415471..1418290 1
Ciunshiu_m11261.g gene: Vacuolar protein sorting-associated protein 9A (sp|Q9LT31|VPS9A_ARATH) Vacuolar sorting protein 9 (VPS9) domain-containing protein (AT3G19770.1); RAB GDP/GTP EXCHANGE factor scaffold00014:1436958..1443853 1
Ciunshiu_m23119.g gene: Probable mediator of RNA polymerase II transcription subunit 37c (sp|Q9LHA8|MD37C_ARATH) heat shock protein 70 (AT3G12580.1); HEAT SHOCK protein 70KDA scaffold00028:41420..50285 1
Ciunshiu_m23129.g gene: THO complex subunit 4A (sp|Q8L773|THO4A_ARATH) RNA-binding (RRM/RBD/RNP motifs) family protein (AT5G59950.3); RNA AND EXPORT factor binding protein scaffold00028:146787..149454 1
Ciunshiu_m23197.g gene: U4/U6 small nuclear ribonucleoprotein Prp3 (sp|Q5R5F1|PRPF3_PONAB) Pre-mRNA-splicing factor 3 (AT1G28060.1); U4/U6 small nuclear ribonucleoprotein Prp3 scaffold00028:676077..680342 1
Ciunshiu_m23261.g gene: Splicing factor U2AF 50 kDa subunit (sp|Q24562|U2AF2_DROME) RNA-binding (RRM/RBD/RNP motifs) family protein (AT2G33435.1); RNA-binding protein scaffold00028:1162043..1171734 1
Ciunshiu_m23258.g gene: Multiple organellar RNA editing factor 6, mitochondrial (sp|O82169|MORF6_ARATH) plastid developmental protein DAG (AT1G32580.1) scaffold00028:1173618..1176069 1
Ciunshiu_m15149.g gene: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase (sp|O22899|DHX15_ARATH) RNA helicase family protein (AT2G47250.1); ATP-DEPENDENT RNA HELICASE scaffold00026:240112..245501 1
Ciunshiu_m15235.g gene: Ribosome production factor 1 (sp|Q5R631|RPF1_PONAB) Ribosomal RNA processing Brix domain protein (AT4G01560.1); U3 SMALL NUCLEOLAR RIBONUCLEOprotein protein IMP4 scaffold00026:873476..876504 1
Ciunshiu_m15284.g gene: Crooked neck-like protein 1 (sp|P63155|CRNL1_RAT) crooked neck protein, putative / cell cycle protein (AT5G41770.1); PRE-MRNA SPLICING factor scaffold00026:1229636..1246400 1
Ciunshiu_m15280.g gene: Crooked neck-like protein 1 (sp|P63155|CRNL1_RAT) crooked neck protein, putative / cell cycle protein (AT5G41770.1); PRE-MRNA SPLICING factor scaffold00026:1252045..1255763 1
Ciunshiu_m10257.g gene: Septin and tuftelin-interacting protein 1 homolog 1 (sp|Q9SHG6|STIP1_ARATH) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein (AT1G17070.1); Septin and tuftelin interacting protein scaffold00019:538535..541839 n/a
Ciunshiu_m10336.g gene: JmjC domain-containing protein 7 (sp|P0C870|JMJD7_HUMAN) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AT3G45880.1); HYPOXIA-INDUCIBLE factor 1 ALPHA INHIBITOR-related scaffold00019:1129791..1132342 n/a
Ciunshiu_m07105.g gene: Inhibitor of trypsin and hageman factor (sp|P19873|ITH5_CUCMA) Serine protease inhibitor, potato inhibitor I-type family protein (AT2G38870.1); Proteinase inhibitor I13, potato inhibitor I scaffold00038:945712..946531 n/a
Ciunshiu_m01129.g gene: Putative lysine-specific demethylase JMJD5 (sp|Q8RWR1|JMJ30_ARATH) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AT3G20810.1); HYPOXIA-INDUCIBLE factor 1 ALPHA INHIBITOR-related scaffold00013:2000270..2004093 n/a
Ciunshiu_m28777.g gene: AT-rich interactive domain-containing protein 5 (sp|Q0WNR6|ARID5_ARATH) ARID/BRIGHT DNA-binding domain-containing protein (AT1G76510.1); AT-rich INTERACTIVE domain-containing protein (ARID domain- containing protein) (DEAD RINGER protein) (B-CELL REGULATOR OF IGH TRANSCRIPTION) (BRIGHT) scaffold00051:677619..684866 n/a
Ciunshiu_m23828.g gene: AT-rich interactive domain-containing protein 5 (sp|Q0WNR6|ARID5_ARATH) ARID/BRIGHT DNA-binding domain-containing protein (AT1G76510.1); AT-rich INTERACTIVE domain-containing protein (ARID domain- containing protein) (DEAD RINGER protein) (B-CELL REGULATOR OF IGH TRANSCRIPTION) (BRIGHT) scaffold00051:677727..684820 n/a
Ciunshiu_m25196.g gene: Putative G3BP-like protein (sp|O94260|G3BP_SCHPO) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AT3G25150.2); RAS GTPASE-ACTIVATING protein-binding protein scaffold00010:1062069..1065523 n/a
Ciunshiu_m25332.g gene: Putative G3BP-like protein (sp|O94260|G3BP_SCHPO) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AT5G43960.1); RAS GTPASE-ACTIVATING protein-binding protein scaffold00010:1932770..1937842 n/a
Ciunshiu_m05636.g gene: Protein FRIGIDA-ESSENTIAL 1 (sp|Q84VG7|FES1_ARATH) Zinc finger C-x8-C-x5-C-x3-H type family protein (AT2G33835.1); SPLICING factor, ARGININE/SERINE-rich 2,RNAP C-TERM INTERACTING protein scaffold00002:3288376..3292520 n/a
Ciunshiu_m27237.g gene: SURP and G-patch domain-containing protein 1-like protein (sp|Q94C11|SUGP1_ARATH) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein (AT3G52120.1); ARGININE/SERINE RICH SPLICING factor SF4/14 scaffold00004:3015763..3020172 n/a
Ciunshiu_m08432.g gene: Mediator of RNA polymerase II transcription subunit 25 (sp|Q7XYY2|MED25_ARATH) phytochrome and flowering time regulatory protein (PFT1) (AT1G25540.1); PROSTATE TUMOR OVEREXPRESSED GENE 1 (PTOV1) scaffold00036:915330..928067 n/a
Ciunshiu_m12583.g gene: U3 small nucleolar RNA-associated protein 21 homolog (sp|O14053|UTP21_SCHPO) transducin family protein / WD-40 repeat family protein (AT4G04940.1); PRE-MRNA SPLICING factor PRP19-related scaffold00005:1060509..1069460 n/a
Ciunshiu_m04300.g gene: AT-rich interactive domain-containing protein 5 (sp|Q0WNR6|ARID5_ARATH) ARID/BRIGHT DNA-binding domain-containing protein (AT1G76510.1); AT-rich INTERACTIVE domain-containing protein (ARID domain- containing protein) (DEAD RINGER protein) (B-CELL REGULATOR OF IGH TRANSCRIPTION) (BRIGHT) scaffold00031:1211650..1218032 n/a
Ciunshiu_m20637.g gene: Putative G3BP-like protein (sp|O94260|G3BP_SCHPO) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AT5G60980.1); RAS GTPASE-ACTIVATING protein-binding protein scaffold00022:1272752..1276725 n/a
Ciunshiu_m28555.g gene: Ras GTPase-activating protein-binding protein 2 (sp|Q5R9L3|G3BP2_PONAB) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AT5G60980.1); RAS GTPASE-ACTIVATING protein-binding protein scaffold00022:1272752..1276758 n/a
Ciunshiu_m24531.g gene: Putative G3BP-like protein (sp|O94260|G3BP_SCHPO) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein (AT5G43960.1); RAS GTPASE-ACTIVATING protein-binding protein scaffold00034:965209..969283 n/a
Ciunshiu_m07977.g gene: Inter alpha-trypsin inhibitor, heavy chain 4 (sp|A6X935|ITIH4_MOUSE) inter-alpha-trypsin inhibitor heavy chain-like protein (AT1G19110.1); VON WILLEBRAND factor, TYPE A domain containing scaffold00007:188113..192589 n/a
Ciunshiu_m23266.g gene: Septin and tuftelin-interacting protein 1 homolog 1 (sp|Q9SHG6|STIP1_ARATH) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein (AT1G17070.1); TUFTELIN-INTERACTING protein 11-related scaffold00028:1101171..1103252 n/a

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