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Landmark or Region: Examples: scaffold00001:2140000..2180000, scaffold00002:800000..1200000, scaffold00003:8000..16000, Sucrose, Peroxidase, P450, Gibberellin, Transcription factor.	Annotate GeneFinder Features Annotate Restriction Sites Download Decorated FASTA File Download Protein Sequence File Download Sequence File Download Track Data
Data Source Satsuma pseudomolecule v1.0 Satsuma v1.0	Scroll/Zoom:     Show 100 kbp Show 50 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 4.396 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp     Flip

The following 31 regions match your request.

 

scaffold00233

 

 

scaffold00423

 

scaffold00077

 

scaffold00228

 

scaffold00135

 

scaffold00044

 

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scaffold00005

 

scaffold00033

 

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scaffold00038

 

scaffold00009

 

scaffold00331

 

scaffold00283

 

 

scaffold00001

 

scaffold00035

 

scaffold00107

 

scaffold00004

 

scaffold00080

 

scaffold00012

 

 

scaffold00003

Name	Type	Description	Position	Match Score
Ciunshiu_m01343.g	gene:	Sucrose synthase 6 (sp|Q9FX32|SUS6_ARATH) sucrose synthase 6 (AT1G73370.3); Sucrose synthase, plant/cyanobacteria	scaffold00423:127234..131629	10
Ciunshiu_m27974.g	gene:	Sucrose synthase (sp|P13708|SUSY_SOYBN) sucrose synthase 4 (AT3G43190.2); GLYCOSYLTRANSFERASE	scaffold00005:2515667..2521402	9
Ciunshiu_m12790.g	gene:	Sucrose synthase (sp|P13708|SUSY_SOYBN) sucrose synthase 4 (AT3G43190.2); GLYCOSYLTRANSFERASE	scaffold00005:2516402..2521402	9
Ciunshiu_m12797.g	gene:	Sucrose synthase (sp|P13708|SUSY_SOYBN) sucrose synthase 1 (AT5G20830.2); GLYCOSYLTRANSFERASE	scaffold00005:2557688..2561181	9
Ciunshiu_m17676.g	gene:	Sucrose transport protein SUC4 (sp|Q9FE59|SUC4_ARATH) sucrose transporter 4 (AT1G09960.1); Sucrose/H+ symporter, plant	scaffold00042:599412..605521	9
Ciunshiu_m19352.g	gene:	Sucrose synthase 6 (sp|Q9FX32|SUS6_ARATH) sucrose synthase 6 (AT1G73370.3); GLYCOSYLTRANSFERASE	scaffold00001:4878882..4882559	8
Ciunshiu_m23604.g	gene:	Sucrose synthase 2 (sp|O24301|SUS2_PEA) sucrose synthase 3 (AT4G02280.1); GLYCOSYLTRANSFERASE	scaffold00012:1831477..1837953	8
Ciunshiu_m21818.g	gene:	Sucrose synthase 2 (sp|Q00917|SUS2_ARATH) sucrose synthase 2 (AT5G49190.1); GLYCOSYLTRANSFERASE	scaffold00003:3124661..3130360	8
Ciunshiu_m01909.g	gene:	Sucrose transport protein SUC3 (sp|O80605|SUC3_ARATH) sucrose transporter 2 (AT2G02860.1); SUGAR TRANSPORTER	scaffold00004:1715272..1721562	7
Ciunshiu_m06251.g	gene:	Sucrose-phosphatase 2 (sp|Q5IH13|SPP2_TOBAC) Sucrose-6F-phosphate phosphohydrolase family protein (AT2G35840.4); GLYCOSYLTRANSFERASE	scaffold00233:305804..311111	6
Ciunshiu_m25739.g	gene:	Probable sucrose-phosphate synthase 1 (sp|O22060|SPSA1_CITUN) sucrose phosphate synthase 1F (AT5G20280.1); GLYCOSYLTRANSFERASE	scaffold00030:938781..944083	6
Ciunshiu_m12647.g	gene:	Probable sucrose-phosphate synthase 1 (sp|O22060|SPSA1_CITUN) sucrose phosphate synthase 1F (AT5G20280.1); GLYCOSYLTRANSFERASE	scaffold00005:1503281..1510594	6
Ciunshiu_m11782.g	gene:	Probable sucrose-phosphate synthase 3 (sp|Q8RY24|SPSA3_ARATH) sucrose phosphate synthase 3F (AT1G04920.1); GLYCOSYLTRANSFERASE	scaffold00033:1060478..1068662	6
Ciunshiu_m18323.g	gene:	Sucrose transport protein SUC2 (sp|Q39231|SUC2_ARATH) sucrose-proton symporter 1 (AT1G71880.1); SUGAR TRANSPORTER	scaffold00009:1279319..1281586	6
Ciunshiu_m19125.g	gene:	Sucrose-phosphatase 2 (sp|Q5IH13|SPP2_TOBAC) Sucrose-6F-phosphate phosphohydrolase family protein (AT2G35840.3); GLYCOSYLTRANSFERASE	scaffold00001:3131851..3135960	6
Ciunshiu_m13090.g	gene:	Probable sucrose-phosphate synthase 4 (sp|F4JLK2|SPSA4_ARATH) Sucrose-phosphate synthase family protein (AT4G10120.5); GLYCOSYLTRANSFERASE	scaffold00107:66303..75401	6
Ciunshiu_m00726.g	gene:	Sucrose nonfermenting 4-like protein (sp|Q944A6|SNF4_ARATH) sucrose nonfermenting-like protein (AT1G09020.1); AMP-ACTIVATED protein kinase, GAMMA regulatory SUBUNIT	scaffold00228:214417..220473	4
Ciunshiu_m07048.g	gene:	Galactinol--sucrose galactosyltransferase (sp|Q8VWN6|RFS_PEA) Raffinose synthase family protein (AT5G40390.1)	scaffold00038:484498..488162	4
Ciunshiu_m21889.g	gene:	Sucrose nonfermenting 4-like protein (sp|Q944A6|SNF4_ARATH) sucrose nonfermenting-like protein (AT1G09020.1); AMP-ACTIVATED protein kinase, GAMMA regulatory SUBUNIT	scaffold00003:3618223..3625353	4
Ciunshiu_m24055.g	gene:	SWI/SNF complex subunit SWI3C (sp|Q9XI07|SWI3C_ARATH) SWITCH/sucrose nonfermenting 3C (AT1G21700.1); Aspartic peptidase	scaffold00077:618995..625254	3
Ciunshiu_m27967.g	gene:	Probable galactinol--sucrose galactosyltransferase 6 (sp|Q8RX87|RFS6_ARATH) Raffinose synthase family protein (AT5G20250.3)	scaffold00005:1588757..1592040	3
Ciunshiu_m12659.g	gene:	Probable galactinol--sucrose galactosyltransferase 6 (sp|Q8RX87|RFS6_ARATH) Raffinose synthase family protein (AT5G20250.3)	scaffold00005:1588757..1592040	3
Ciunshiu_m12882.g	gene:	Probable galactinol--sucrose galactosyltransferase 1 (sp|Q84VX0|RFS1_ARATH) seed imbibition 1 (AT1G55740.1)	scaffold00005:3159840..3163729	3
Ciunshiu_m07003.g	gene:	Probable galactinol--sucrose galactosyltransferase 2 (sp|Q94A08|RFS2_ARATH) seed imbibition 2 (AT3G57520.3)	scaffold00038:84041..90337	3
Ciunshiu_m19500.g	gene:	Probable galactinol--sucrose galactosyltransferase 2 (sp|Q94A08|RFS2_ARATH) seed imbibition 1 (AT1G55740.1)	scaffold00331:108934..114826	3
Ciunshiu_m04103.g	gene:	Probable galactinol--sucrose galactosyltransferase 2 (sp|Q94A08|RFS2_ARATH) seed imbibition 2 (AT3G57520.1)	scaffold00283:213063..219586	3
Ciunshiu_m01614.g	gene:	Probable galactinol--sucrose galactosyltransferase 5 (sp|Q9FND9|RFS5_ARATH) Raffinose synthase family protein (AT5G40390.1)	scaffold00035:919387..922891	3
Ciunshiu_m01347.g	gene:	Sucrose synthase 7 (sp|Q7XNX6|SUS7_ORYSJ) DHHA1 domain protein (AT1G53345.1); TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE family member	scaffold00423:128102..134938	2
Ciunshiu_m24374.g	gene:	SWI/SNF complex subunit SWI3A (sp|Q8W475|SWI3A_ARATH) SWITCH/sucrose nonfermenting 3A (AT2G47620.1); SWI/SNF COMPLEX-related	scaffold00135:282953..287590	2
Ciunshiu_m25450.g	gene:	Tocopherol cyclase, chloroplastic (sp|Q94FY7|TOCC_ARATH) tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) (AT4G32770.1); Tocopherol cyclase	scaffold00044:288920..296287	2
Ciunshiu_m00069.g	gene:	Serine/threonine-protein kinase SAPK10 (sp|Q75H77|SAPKA_ORYSJ) sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (AT5G66880.1); SERINE/THREONINE kinase	scaffold00080:682675..686849	2

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3'-UTR	6-frame translation	Simple sequence repeat (SSR) [?]
3-frame translation (forward)	LTR-retrotransposons [?]	Transcript [?]
3-frame translation (reverse)	Masked repeat region [?]
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